RNA–Protein interactions for RNA: ENST00000476792.1

LIMK1-204, Transcript of LIM domain kinase 1, humanhuman

TSL 2

Gene LIMK1, Length 785 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-204ENST00000476792 RPL27AP46776 148 aaKnown RBP16.36■□□□□ 0.21
LIMK1-204ENST00000476792 RFX2P48378 723 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 EXOSC2Q13868 293 aaKnown RBP16.36■□□□□ 0.21
LIMK1-204ENST00000476792 KLF5Q13887 457 aaPredicted RBP16.36■□□□□ 0.21
LIMK1-204ENST00000476792 C19orf35Q6ZS72 473 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 TTC9CQ8N5M4 171 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 ZBTB34Q8NCN2 500 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 OR51H1Q8NH63 302 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 GIMAP1Q8WWP7 306 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 SLC25A46Q96AG3 418 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 HRASLSQ9HDD0 168 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 COMMD3Q9UBI1 195 aa16.36■□□□□ 0.21
LIMK1-204ENST00000476792 OR2J3O76001 311 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 EIF4EP06730 217 aaKnown RBP16.35■□□□□ 0.21
LIMK1-204ENST00000476792 IL6RP08887 468 aaPredicted RBP16.35■□□□□ 0.21
LIMK1-204ENST00000476792 CATR1Q13166 79 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 MSMO1Q15800 293 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 RPEL1Q2QD12 228 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 ZNF818PQ6ZRF7 136 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 OR9G4Q8NGQ1 327 aa16.35■□□□□ 0.21
LIMK1-204ENST00000476792 FAM223BA6NKX1 122 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 TRIM64CA6NLI5 447 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 TEX22C9J3V5 150 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 E7EUB6 86 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 PRSS3P35030 304 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 AADACL3Q5VUY0 350 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 OR4A47Q6IF82 309 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 SLC25A42Q86VD7 318 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 FAM223AQ8IWN6 122 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 OR5H2Q8NGV7 314 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 ZNF2Q9BSG1 426 aaPredicted RBP16.34■□□□□ 0.21
LIMK1-204ENST00000476792 U3KQK5 164 aa16.34■□□□□ 0.21
LIMK1-204ENST00000476792 TRBV9A0A0B4J1U6 114 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 IGLV1-51P01701 117 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 RPA2P15927 270 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 MAS1LP35410 378 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 RPL8P62917 257 aaKnown RBP16.33■□□□□ 0.2
LIMK1-204ENST00000476792 TATDN3Q17R31 274 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 KCTD12Q96CX2 325 aaKnown RBP16.33■□□□□ 0.2
LIMK1-204ENST00000476792 WWC2-AS2Q96NR7 200 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 ZNF257Q9Y2Q1 563 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 COL7A1Q02388 2944 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 DNAH9Q9NYC9 4486 aa16.33■□□□□ 0.2
LIMK1-204ENST00000476792 SMIM31A0A1B0GVY4 71 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 A0A1B0GW64 132 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 AREGP15514 252 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 HLA-GP17693 338 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 HLA-DMAP28067 261 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 C15orf32Q32M92 178 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 IL34Q6ZMJ4 242 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 NECAP1Q8NC96 275 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 AIFM2Q9BRQ8 373 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 SLC2A9Q9NRM0 540 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 FBXL7Q9UJT9 491 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 ANAPC10Q9UM13 185 aa16.32■□□□□ 0.2
LIMK1-204ENST00000476792 BMPR1BO00238 502 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 RBFOX2O43251 390 aaKnown RBP eCLIP16.31■□□□□ 0.2
LIMK1-204ENST00000476792 HPRT1P00492 218 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 IGHV3-23P01764 117 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 REG1AP05451 166 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 ZNF735P0CB33 412 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 GNRHRP30968 328 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 TAS2R46P59540 309 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 DHRS11Q6UWP2 260 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 SNX29P2Q8IUI4 249 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 BET1LQ9NYM9 111 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 S4R3C0 116 aa16.31■□□□□ 0.2
LIMK1-204ENST00000476792 TRAV3A0A0B4J244 114 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 NPIPB5A8MRT5 1133 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 HPGDSO60760 199 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 S1PR2O95136 353 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 RLN1P04808 185 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 CSN3P07498 182 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 FRMD6-AS1P0C7T7 363 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 TAS2R31P59538 309 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 SBSPONQ8IVN8 264 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 DMBX1Q8NFW5 382 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 OR4A5Q8NH83 315 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 MOB3AQ96BX8 217 aa16.3■□□□□ 0.2
LIMK1-204ENST00000476792 NAA50Q9GZZ1 169 aaKnown RBP16.3■□□□□ 0.2
LIMK1-204ENST00000476792 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.29■□□□□ 0.2
LIMK1-204ENST00000476792 PPP5D1E7EU14 171 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 UPK2O00526 184 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 NDUFB8O95169 186 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 APOA1P02647 267 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 NQO2P16083 231 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 NAT1P18440 290 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 PSMB6P28072 239 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 HRH1P35367 487 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 LYSMD2Q8IV50 215 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 BORCS5Q969J3 196 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 TMEM140Q9NV12 185 aa16.29■□□□□ 0.2
LIMK1-204ENST00000476792 PGLYRP1O75594 196 aaPredicted RBP16.28■□□□□ 0.2
LIMK1-204ENST00000476792 HLA-AP01891 365 aaKnown RBP16.28■□□□□ 0.2
LIMK1-204ENST00000476792 SMIM18P0DKX4 95 aa16.28■□□□□ 0.2
LIMK1-204ENST00000476792 DEFA4P12838 97 aa16.28■□□□□ 0.2
LIMK1-204ENST00000476792 ELK1P19419 428 aa16.28■□□□□ 0.2
LIMK1-204ENST00000476792 RORCP51449 518 aa16.28■□□□□ 0.2
LIMK1-204ENST00000476792 OR6F1Q8NGZ6 308 aa16.28■□□□□ 0.2
LIMK1-204ENST00000476792 CD300LFQ8TDQ1 290 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms