RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 ST6GALNAC6Q969X2 333 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 MARC2Q969Z3 335 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 HARBI1Q96MB7 349 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 VSIRQ9H7M9 311 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 LPAR2Q9HBW0 351 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 TPSG1Q9NRR2 321 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 MED9Q9NWA0 146 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 CACFD1Q9UGQ2 172 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 TCF19Q9Y242 345 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 STRAPQ9Y3F4 350 aaKnown RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 C15orf62A8K5M9 175 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 PMS2P5A8MQ11 134 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 GPR37O15354 613 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 SEC11BP0C7V7 166 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 CNTFRP26992 372 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 KIR2DS2P43631 304 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 HOXA1P49639 335 aaPredicted RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 LCN2P80188 198 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 SRSF1Q07955 248 aaKnown RBP eCLIP5.05□□□□□ -1.62e-6■□□□□ 10.6
CLK1-210ENST00000473565 RTL8BQ17RB0 113 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 C10orf55Q5SWW7 151 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 HSD17B13Q7Z5P4 300 aaPredicted RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 TGIF2LXQ8IUE1 241 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 TMEM170AQ8WVE7 144 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 ADTRPQ96IZ2 230 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 SSBP3Q9BWW4 388 aaPredicted RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 BPESC1Q9GZL8 116 aa5.05□□□□□ -1.6
CLK1-210ENST00000473565 PATZ1Q9HBE1 687 aaKnown RBP5.05□□□□□ -1.6
CLK1-210ENST00000473565 C15orf61A6NNL5 157 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 C9JQL5 133 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 E7EUB6 86 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 IFNA10P01566 189 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 IGHV4-39P01824 125 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 DEFA4P12838 97 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 CD24P25063 80 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 ELLP55199 621 aaPredicted RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 PJVKQ0ZLH3 352 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 TMEM30BQ3MIR4 351 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 OR10W1Q8NGF6 305 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LRRC20Q8TCA0 184 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 MMP26Q9NRE1 261 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HELZ2Q9BYK8 2649 aaKnown RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 LOC105371242A0A075B767 164 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 IFNA5P01569 189 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 IGLV1-47P01700 117 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 APOA2P02652 100 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LIPFP07098 398 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 APELAP0DMC3 54 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 VDAC2P45880 294 aaPredicted RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 EFNA4P52798 201 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 TAS2R30P59541 319 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 SPCS3P61009 180 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 CCL20P78556 96 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HLA-DRB5Q30154 266 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 BTNL8Q6UX41 500 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 MOB3BQ86TA1 216 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 OR5AN1Q8NGI8 311 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 OR4P4Q8NGL7 312 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 RAB39BQ96DA2 213 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 CLEC7AQ9BXN2 247 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 TREM1Q9NP99 234 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 OR51B2Q9Y5P1 312 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 DOPEY2Q9Y3R5 2298 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 A0A087X0M5 115 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 A0A1B0GX30 115 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 UPK2O00526 184 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 SLC25A17O43808 307 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HRASP01112 189 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 APOC3P02656 99 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HBG1P69891 147 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HBG2P69892 147 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 FBLN7Q53RD9 439 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 SSX7Q7RTT5 188 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LHFPL4Q7Z7J7 247 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LINC00311Q8N616 119 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LY6G5BQ8NDX9 201 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 SCGB1C1Q8TD33 95 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 FAM216AQ8WUB2 273 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 LHX4Q969G2 390 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 TMEM186Q96B77 213 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 FLYWCH2Q96CP2 140 aaKnown RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 SAT2Q96F10 170 aaPredicted RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 TMEM14BQ9NUH8 114 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 HILPDAQ9Y5L2 63 aa5.04□□□□□ -1.6
CLK1-210ENST00000473565 KMT2BQ9UMN6 2715 aaPredicted RBP5.04□□□□□ -1.6
CLK1-210ENST00000473565 SMCO3A2RU48 225 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 HMGB3O15347 200 aaKnown RBP5.03□□□□□ -1.6
CLK1-210ENST00000473565 DFFBO76075 338 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 TSPAN15O95858 294 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ADCYAP1P18509 176 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ZP3P21754 424 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 COL8A1P27658 744 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ATRAIDQ6UW56 229 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 ZNF596Q8TC21 504 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 C17orf50Q8WW18 174 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 TSNAXQ99598 290 aaKnown RBP5.03□□□□□ -1.6
CLK1-210ENST00000473565 WDR61Q9GZS3 305 aaKnown RBP5.03□□□□□ -1.6
CLK1-210ENST00000473565 PARP11Q9NR21 331 aa5.03□□□□□ -1.6
CLK1-210ENST00000473565 NAV2Q8IVL1 2488 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms