RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 MMD2Q8IY49 270 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 SELENOHQ8IZQ5 122 aaKnown RBP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 OR4F5Q8NH21 305 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 OR2T6Q8NHC8 308 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 RNASE11Q8TAA1 199 aaKnown RBP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 TMEM167AQ8TBQ9 72 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 RRNAD1Q96FB5 475 aaKnown RBP12.06□□□□□ -0.48
SNIP1-202ENST00000468040 SEC22AQ96IW7 307 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 ZNF702PQ9H963 129 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 TPSG1Q9NRR2 321 aa12.06□□□□□ -0.48
SNIP1-202ENST00000468040 DUXBA0A1W2PPF3 345 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 SH2D7A6NKC9 451 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-202ENST00000468040 PRAF2O60831 178 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 DHFRP00374 187 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 CA2P00918 260 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 IL5P05113 134 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 HKR1P10072 659 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 RELBQ01201 579 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 ZNF562Q6V9R5 426 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 SLC35E3Q7Z769 313 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 FAM219AQ8IW50 185 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 LRTM2Q8N967 370 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 LHFPL5Q8TAF8 219 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 CLCC1Q96S66 551 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 C16orf95Q9H693 158 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 ZNF430Q9H8G1 570 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-202ENST00000468040 GPN1Q9HCN4 374 aaPredicted RBP12.05□□□□□ -0.48
SNIP1-202ENST00000468040 PRR13Q9NZ81 148 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 MMP24Q9Y5R2 645 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 CUBNO60494 3623 aa12.05□□□□□ -0.48
SNIP1-202ENST00000468040 ZFHX3Q15911 3703 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 IGHV7-81A0A0B4J1V7 117 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 A0A0B4J2A0 478 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 UPK2O00526 184 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 FCN1O00602 326 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 SNAPC5O75971 98 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 IGKV1-5P01602 117 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 IGHG2P01859 326 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 IL6RP08887 468 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-202ENST00000468040 SPNP16150 400 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 VDAC1P21796 283 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 MAS1LP35410 378 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 RPL8P62917 257 aaKnown RBP12.04□□□□□ -0.48
SNIP1-202ENST00000468040 ANKRD55Q3KP44 614 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 FOXRED2Q8IWF2 684 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-202ENST00000468040 SLC35G3Q8N808 338 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 ZNF431Q8TF32 576 aaPredicted RBP12.04□□□□□ -0.48
SNIP1-202ENST00000468040 MITD1Q8WV92 249 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 LSM10Q969L4 123 aaKnown RBP12.04□□□□□ -0.48
SNIP1-202ENST00000468040 PHB2Q99623 299 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 HSPB9Q9BQS6 159 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 SHPKQ9UHJ6 478 aa12.04□□□□□ -0.48
SNIP1-202ENST00000468040 CNIH1O95406 144 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 HLA-GP17693 338 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 GNB1P62873 340 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 CX3CL1P78423 397 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 PJVKQ0ZLH3 352 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 FXYD3Q14802 87 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 Q6ZS46 218 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 MINDY2Q8NBR6 621 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 OR52B4Q8NGK2 314 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 SEC22CQ9BRL7 303 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 OR51J1Q9H342 316 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 PRNDQ9UKY0 176 aa12.03□□□□□ -0.48
SNIP1-202ENST00000468040 JMJD1CQ15652 2540 aa12.02□□□□□ -0.48
SNIP1-202ENST00000468040 A0A1B0GUS0 222 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 SNRPGP15A8MWD9 76 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 AP4M1O00189 453 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 P0C879 139 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 VDAC2P45880 294 aaPredicted RBP12.02□□□□□ -0.49
SNIP1-202ENST00000468040 COMPP49747 757 aaPredicted RBP12.02□□□□□ -0.49
SNIP1-202ENST00000468040 FOXL1Q12952 345 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 OXA1LQ15070 435 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 TNXAQ16473 311 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 MRGPRG-AS1Q2M3A8 158 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 KRTAP24-1Q3LI83 254 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 LYZL2Q7Z4W2 148 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 OR4A16Q8NH70 328 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM158Q8WZ71 300 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 ARPC1AQ92747 370 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 COMMD5Q9GZQ3 224 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 FKBP11Q9NYL4 201 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 ZNF580Q9UK33 172 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
SNIP1-202ENST00000468040 C15orf61A6NNL5 157 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 RBMXL2O75526 392 aaKnown RBP12.01□□□□□ -0.49
SNIP1-202ENST00000468040 IGF1P05019 195 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 OR9G9P0C7N8 305 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 LINC01006Q8NI28 216 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 ABHD5Q8WTS1 349 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 TAF15Q92804 592 aaKnown RBP eCLIP12.01□□□□□ -0.49
SNIP1-202ENST00000468040 GON7Q9BXV9 100 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 PARP11Q9NR21 331 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 SERTAD4Q9NUC0 356 aa12.01□□□□□ -0.49
SNIP1-202ENST00000468040 NF1P21359 2839 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 TRAV3A0A0B4J244 114 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 TMEM89A2RUT3 159 aa12□□□□□ -0.49
SNIP1-202ENST00000468040 CLPSL1A2RUU4 121 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms