RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 OPN1MW3P0DN78 364 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 VDAC2P45880 294 aaPredicted RBP11.05□□□□□ -0.64
UBE4B-206ENST00000466379 RTL8BQ17RB0 113 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 ZNF841Q6ZN19 808 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 SSX7Q7RTT5 188 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 ABHD12Q8N2K0 398 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 SVBPQ8N300 66 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 C11orf42Q8N5U0 333 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 COMMD1Q8N668 190 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 TMEM147Q9BVK8 224 aa11.05□□□□□ -0.64
UBE4B-206ENST00000466379 SPTBN1Q01082 2364 aaKnown RBP11.04□□□□□ -0.64
UBE4B-206ENST00000466379 H7C2Y5 167 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 HRASP01112 189 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 ARG1P05089 322 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 IGHV1-8P0DP01 117 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 FGF7P21781 194 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 NPBWR1P48145 328 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 ZNF726P1Q15940 193 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 C11orf71Q6IPW1 123 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 ITLN2Q8WWU7 325 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-206ENST00000466379 HINT2Q9BX68 163 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 RAB1BQ9H0U4 201 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 C19orf84I3L1E1 186 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 DNASE2O00115 360 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-206ENST00000466379 TSPAN4O14817 238 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 OR8U8P0C7N1 319 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 PEA15Q15121 130 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 HAGHQ16775 308 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 ZNF429Q86V71 674 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 OR52E5Q8NH55 327 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 TMEM170AQ8WVE7 144 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 PINX1Q96BK5 328 aaKnown RBP11.04□□□□□ -0.64
UBE4B-206ENST00000466379 CLCC1Q96S66 551 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 PSMG3Q9BT73 122 aaPredicted RBP11.04□□□□□ -0.64
UBE4B-206ENST00000466379 HIPK2Q9H2X6 1198 aa11.04□□□□□ -0.64
UBE4B-206ENST00000466379 H0YJW9 148 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 FGF8P55075 233 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-206ENST00000466379 RAB2AP61019 212 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 GNB2P62879 340 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 TLE4Q04727 773 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 ATP6V1FQ16864 119 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 C4orf17Q53FE4 359 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 ACSM6Q6P461 480 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 LCN15Q6UWW0 184 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 PARD6GQ9BYG4 376 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-206ENST00000466379 TMEM14BQ9NUH8 114 aa11.03□□□□□ -0.64
UBE4B-206ENST00000466379 FOXA2Q9Y261 457 aaPredicted RBP11.03□□□□□ -0.64
UBE4B-206ENST00000466379 IGKV1D-33P01593 117 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 IGKV1-33P01594 117 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 SAA1P0DJI8 122 aaPredicted RBP11.02□□□□□ -0.64
UBE4B-206ENST00000466379 TMEM88Q6PEY1 159 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 LFNGQ8NES3 379 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 RAB39BQ96DA2 213 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 OR51B2Q9Y5P1 312 aa11.02□□□□□ -0.64
UBE4B-206ENST00000466379 MALRD1Q5VYJ5 2156 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 TRBV23-1A0A0A0MS06 115 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 SMCO3A2RU48 225 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 APOA2P02652 100 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 OR13C7P0DN81 318 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 POU2AF1Q16633 256 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 PDLIM3Q53GG5 364 aaPredicted RBP11.02□□□□□ -0.65
UBE4B-206ENST00000466379 AKIRIN2Q53H80 203 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 SP5Q6BEB4 398 aaPredicted RBP11.02□□□□□ -0.65
UBE4B-206ENST00000466379 DPPA3Q6W0C5 159 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 ETV3LQ6ZN32 361 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 HARBI1Q96MB7 349 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 NABP2Q9BQ15 211 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 AIFM2Q9BRQ8 373 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 PBDC1Q9BVG4 233 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 TMEM133Q9H2Q1 129 aa11.02□□□□□ -0.65
UBE4B-206ENST00000466379 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 UPK2O00526 184 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 CDKN1AP38936 164 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 HSPE1P61604 102 aaKnown RBP11.01□□□□□ -0.65
UBE4B-206ENST00000466379 TMEM41BQ5BJD5 291 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 DHRS7BQ6IAN0 325 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-206ENST00000466379 LINC00311Q8N616 119 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 OR9G1Q8NH87 305 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 ZNF596Q8TC21 504 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 ST6GALNAC6Q969X2 333 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
UBE4B-206ENST00000466379 A0A087X0M5 115 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 IGHV3-72A0A0B4J1Y9 119 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 PPIAL4CA0A0B4J2A2 164 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 A0A1B0GX30 115 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 HMGB3O15347 200 aaKnown RBP11.01□□□□□ -0.65
UBE4B-206ENST00000466379 IL6RP08887 468 aaPredicted RBP11.01□□□□□ -0.65
UBE4B-206ENST00000466379 FBP1P09467 338 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 PPIAL4GP0DN37 164 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 SERF2P84101 59 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 VWC2Q2TAL6 325 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 CBLN2Q8IUK8 224 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 OR8B3Q8NGG8 313 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 OR5AN1Q8NGI8 311 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 OR8B2Q96RD0 313 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 NPCDR1Q9BY65 106 aa11.01□□□□□ -0.65
UBE4B-206ENST00000466379 NDUFS7O75251 213 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 IFNA4P05014 189 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 DEFA4P12838 97 aa11□□□□□ -0.65
UBE4B-206ENST00000466379 COX7A1P24310 79 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms