RNA–Protein interactions for RNA: ENST00000463013.1

KDM3A-208, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-208ENST00000463013 ZNF75CPQ92670 426 aaPredicted RBP0.52□□□□□ -2.33
KDM3A-208ENST00000463013 MED10Q9BTT4 135 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 TMEM109Q9BVC6 243 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 CHST6Q9GZX3 395 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 ZNHIT6Q9NWK9 470 aaKnown RBP0.52□□□□□ -2.33
KDM3A-208ENST00000463013 SCAF11Q99590 1463 aaKnown RBP0.52□□□□□ -2.33
KDM3A-208ENST00000463013 CLASP1Q7Z460 1538 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 NISCHQ9Y2I1 1504 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 CFAP47Q6ZTR5 3102 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 EIF4G3O43432 1585 aaKnown RBP0.52□□□□□ -2.33
KDM3A-208ENST00000463013 CENPFP49454 3210 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 MADDQ8WXG6 1647 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 RIMS1Q86UR5 1692 aaKnown RBP0.52□□□□□ -2.33
KDM3A-208ENST00000463013 PKD1L2Q7Z442 2459 aa0.52□□□□□ -2.33
KDM3A-208ENST00000463013 TMED7-TICAM2A0A0A6YYA0 188 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 TEX50A0A1B0GTY4 177 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 A0A1B0GW54 56 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 A0A1W2PP64 1363 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 MEIS3P1A6NDR6 274 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 OR51F1A6NGY5 319 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 CCRL2O00421 344 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 MAPKBP1O60336 1514 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 STX10O60499 249 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 SCN2BO60939 215 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 NPPAP01160 153 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 CXCL3P19876 107 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 PTPRMP28827 1452 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 FLT4P35916 1363 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 LRPPRCP42704 1394 aaKnown RBP0.51□□□□□ -2.33
KDM3A-208ENST00000463013 PLPPR5Q32ZL2 321 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 BCORL1Q5H9F3 1711 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 C9orf64Q5T6V5 341 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 RASSF6Q6ZTQ3 369 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 CRLF3Q8IUI8 442 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 GID4Q8IVV7 300 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 RIBC1Q8N443 379 aaPredicted RBP0.51□□□□□ -2.33
KDM3A-208ENST00000463013 RAB2BQ8WUD1 216 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 NSRP1Q9H0G5 558 aaKnown RBP0.51□□□□□ -2.33
KDM3A-208ENST00000463013 CHMP5Q9NZZ3 219 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 MRC2Q9UBG0 1479 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 ALKQ9UM73 1620 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 RIMS2Q9UQ26 1411 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 LAMC3Q9Y6N6 1575 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 BRCA2P51587 3418 aa0.51□□□□□ -2.33
KDM3A-208ENST00000463013 LAMB4A4D0S4 1761 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 PREX1Q8TCU6 1659 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 KIAA0556O60303 1618 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 LRRC7Q96NW7 1537 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 GAPVD1Q14C86 1478 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 ABCC10Q5T3U5 1492 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 C5orf49A4QMS7 147 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 F8VZ95 297 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 PPBPP02775 128 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 TFPTP0C1Z6 253 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 TRGC1P0CF51 173 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 RPS24P62847 133 aaKnown RBP0.5□□□□□ -2.33
KDM3A-208ENST00000463013 HLA-DRB3P79483 266 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 DYNAPQ8N1N2 210 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 NAT8Q9UHE5 227 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 TP53TG1Q9Y2A0 90 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 RANBP2P49792 3224 aaKnown RBP0.5□□□□□ -2.33
KDM3A-208ENST00000463013 CFAP54Q96N23 3096 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 GREB1Q4ZG55 1949 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
KDM3A-208ENST00000463013 ADGBQ8N7X0 1667 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 HTTP42858 3142 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 BCL9LQ86UU0 1499 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 USP34Q70CQ2 3546 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
KDM3A-208ENST00000463013 IBA57-AS1B1ANH7 110 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 ATP8B1O43520 1251 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 NEMFO60524 1076 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 ATP6V1G2O95670 118 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 RD3LP0DJH9 198 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 CCL5P13501 91 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SLCO1A2P46721 670 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 REG1BP48304 166 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 JOSD1Q15040 202 aaPredicted RBP0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SPATA24Q86W54 205 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 BOD1L2Q8IYS8 172 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 UMODL1-AS1Q8N2C9 162 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 FAM19A2Q8N3H0 131 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SPERTQ8NA61 448 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SLC37A2Q8TED4 501 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 TIPINQ9BVW5 301 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 REG4Q9BYZ8 158 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 OR52A5Q9H2C5 316 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 WDFY4Q6ZS81 3184 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 TRANK1O15050 2925 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 ASPMQ8IZT6 3477 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 XIRP2A4UGR9 3374 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SPEGQ15772 3267 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SCRIBQ14160 1630 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 ZFHX3Q15911 3703 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 SYNJ1O43426 1573 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 KDM5CP41229 1560 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 REV3LO60673 3130 aa0.49□□□□□ -2.33
KDM3A-208ENST00000463013 CUX1P39880 1505 aa0.48□□□□□ -2.33
KDM3A-208ENST00000463013 SHANK2Q9UPX8 1470 aa0.48□□□□□ -2.33
KDM3A-208ENST00000463013 DCHS1Q96JQ0 3298 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms