RNA–Protein interactions for RNA: ENST00000461889.1

TRAPPC10-205, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-205ENST00000461889 ARMC1Q9NVT9 282 aa4.54□□□□□ -1.68
TRAPPC10-205ENST00000461889 IGHV3OR16-12A0A075B7B8 117 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 TRAV14DV4A0A0A6YYC5 116 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 OR2T8A6NH00 312 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 H3BMM0 161 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 IL6RP08887 468 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 DEFB130BP0DP73 79 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 DEFB130AP0DP74 79 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 CXCR4P61073 352 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 RSU1Q15404 277 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 RRN3P1Q2M238 152 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 IFT20Q8IY31 132 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 OR10K1Q8NGX5 313 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 KCTD14Q9BQ13 255 aaPredicted RBP4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 JAM3Q9BX67 310 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 IL36GQ9NZH8 169 aa4.53□□□□□ -1.68
TRAPPC10-205ENST00000461889 TRAV26-1A0A087WT03 109 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 IGHV3-49A0A0A0MS15 119 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 A0A0J9YXV3 536 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 NUPL2O15504 423 aaKnown RBP4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 RPP14O95059 124 aaKnown RBP4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 GASTP01350 101 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 ISG15P05161 165 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 ZNF688P0C7X2 276 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 ZNF735P0CB33 412 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 AREGP15514 252 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 HMGA2P52926 109 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 CDK10Q15131 360 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 HMGN3Q15651 99 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 TMEM244Q5VVB8 128 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 SIGIRRQ6IA17 410 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 IDO2Q6ZQW0 420 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 LRTM2Q8N967 370 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 ANKRD42Q8N9B4 389 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 HSD17B11Q8NBQ5 300 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 FCGR1BQ92637 280 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 PTX4Q96A99 478 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 CPNE2Q96FN4 548 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 C11orf54Q9H0W9 315 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 THYN1Q9P016 225 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 RABAC1Q9UI14 185 aa4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.52□□□□□ -1.69
TRAPPC10-205ENST00000461889 IGHV3OR16-13A0A075B7E8 117 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 IGHV3-74A0A0B4J1X5 117 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 E7EUB6 86 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 GABRPO00591 440 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 ST8SIA3O43173 380 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 SULT1C4O75897 302 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 GLAP06280 429 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 MRPL3P09001 348 aaKnown RBP4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 RRASP10301 218 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 DEFA4P12838 97 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 M6PRP20645 277 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 CBX3Q13185 183 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 COQ5Q5HYK3 327 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 C1orf158Q8N1D5 194 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 OR9Q2Q8NGE9 314 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 MRPL30Q8TCC3 161 aaKnown RBP4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 DCANP1Q8TF63 244 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 TNFAIP8L1Q8WVP5 186 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 Q96M66 194 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 NEDD4LQ96PU5 975 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 EBF4Q9BQW3 602 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 ROPN1BQ9BZX4 212 aaPredicted RBP4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 ARL8BQ9NVJ2 186 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 AP3M1Q9Y2T2 418 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 GOLT1BQ9Y3E0 138 aa4.51□□□□□ -1.69
TRAPPC10-205ENST00000461889 M0R1X1 148 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 PSCAO43653 123 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 NXPH4O95158 308 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 KRT8P05787 483 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 RRM2P31350 389 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 RPL11P62913 178 aaKnown RBP4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 SRSF3P84103 164 aaKnown RBP4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 RELQ04864 619 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 TPBGQ13641 420 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 RTL8BQ17RB0 113 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 RAB12Q6IQ22 244 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 TPRA1Q86W33 373 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 OR4C16Q8NGL9 310 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 OSR1Q8TAX0 266 aaPredicted RBP4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 ST8SIA2Q92186 375 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 CLUHP3Q96NS8 147 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 METTL9Q9H1A3 318 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 ABRACLQ9P1F3 81 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 GHRLQ9UBU3 117 aa4.5□□□□□ -1.69
TRAPPC10-205ENST00000461889 CCDC182A6NF36 153 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 EIF4EP06730 217 aaKnown RBP4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 CTSGP08311 255 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 SAA1P0DJI8 122 aaPredicted RBP4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 HLA-DRB4P13762 266 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 MGMTP16455 207 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 ATP6V1B2P21281 511 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 TSPOP30536 169 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 CASQ1P31415 396 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 RPL27AP46776 148 aaKnown RBP4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 PSMD7P51665 324 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 CCR9P51686 369 aa4.49□□□□□ -1.69
TRAPPC10-205ENST00000461889 TDRG1Q3Y452 100 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms