RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 MMD2Q8IY49 270 aa16.08■□□□□ 0.16
RPUSD3-210ENST00000460909 POC5Q8NA72 575 aa16.08■□□□□ 0.16
RPUSD3-210ENST00000460909 VSTM2AQ8TAG5 236 aa16.08■□□□□ 0.16
RPUSD3-210ENST00000460909 ZNF486Q96H40 463 aaPredicted RBP16.08■□□□□ 0.16
RPUSD3-210ENST00000460909 A0A1W2PN81 502 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 NQO2P16083 231 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 PI3P19957 117 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 CHRNA7P36544 502 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 CDX1P47902 265 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 PPP5CP53041 499 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 KLF9Q13886 244 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 TNXAQ16473 311 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 SCGB2B2Q4G0G5 96 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 SPANXN2Q5MJ10 180 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 OR4A47Q6IF82 309 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 SSX9Q7RTT3 188 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 MARCH1Q8TCQ1 289 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 AIFM2Q9BRQ8 373 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 SRRQ9GZT4 340 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 FAM212BQ9NTI7 297 aaPredicted RBP16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 BET1LQ9NYM9 111 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 COMMD9Q9P000 198 aa16.07■□□□□ 0.16
RPUSD3-210ENST00000460909 DISC1C4P0D8 188 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 MPPED1O15442 326 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 CREBL2O60519 120 aaPredicted RBP16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 PF4V1P10720 104 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 PGAM2P15259 253 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 S100GP29377 79 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 LPAR6P43657 344 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 RAB9AP51151 201 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 C10orf55Q5SWW7 151 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 ZNF695Q8IW36 515 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 OR51S1Q8NGJ8 323 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 OR5M8Q8NGP6 311 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 OR13C8Q8NGS7 320 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 SRSF12Q8WXF0 261 aaKnown RBP16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 SLC2A8Q9NY64 477 aa16.06■□□□□ 0.16
RPUSD3-210ENST00000460909 MSGN1A6NI15 193 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 SLC6A1P30531 599 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 PIGPP57054 158 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 ETV3LQ6ZN32 361 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 ZNF491Q8N8L2 437 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 KLHL30-AS1Q8NEE0 82 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 ZFAND1Q8TCF1 268 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 CASTOR1Q8WTX7 329 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 TMEM68Q96MH6 324 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 PRRT1Q99946 306 aa16.05■□□□□ 0.16
RPUSD3-210ENST00000460909 TRAV3A0A0B4J244 114 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 E7EUB6 86 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 CTSDP07339 412 aaPredicted RBP16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 MAS1LP35410 378 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 TMEM65Q6PI78 240 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 C8orf86Q6ZUL3 223 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 CADM3Q8N126 398 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 OR4A5Q8NH83 315 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 UBE2E2Q96LR5 201 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 TMEM140Q9NV12 185 aa16.04■□□□□ 0.16
RPUSD3-210ENST00000460909 A0A1B0GW64 132 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 MARCH11A6NNE9 402 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 UPK2O00526 184 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 ACTL6BO94805 426 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 IGKV1-39P01597 117 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 IGKV1D-39P04432 117 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 ECI1P42126 302 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 RPL8P62917 257 aaKnown RBP16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 SURF2Q15527 256 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 DMBX1Q8NFW5 382 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 OR5T1Q8NG75 326 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 SDHCQ99643 169 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 RTBDNQ9BSG5 229 aaPredicted RBP16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 HRASLSQ9HDD0 168 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 GPR132Q9UNW8 380 aa16.03■□□□□ 0.16
RPUSD3-210ENST00000460909 NUDT19A8MXV4 375 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 TEX22C9J3V5 150 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 BRI3O95415 125 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 KRASP01116 189 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 FGF2P09038 288 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 APELAP0DMC3 54 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 MYOD1P15172 320 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 RPA2P15927 270 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 TOMM5Q8N4H5 51 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 GDPD1Q8N9F7 314 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 WFDC9Q8NEX5 89 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 C4orf3Q8WVX3 66 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 SPIN2AQ99865 258 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 SPIN2BQ9BPZ2 258 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 C5orf66Q9H5L9 145 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 GNB4Q9HAV0 340 aa16.02■□□□□ 0.16
RPUSD3-210ENST00000460909 NOTCH1P46531 2555 aa16.02■□□□□ 0.15
RPUSD3-210ENST00000460909 CGB1A6NKQ9 187 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 H0Y980 276 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 HLA-GP17693 338 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 G6PCP35575 357 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 AP3S2P59780 193 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 BAK1Q16611 211 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 CNPY1Q3B7I2 92 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 DEDD2Q8WXF8 326 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 RAX2Q96IS3 184 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 SEC22AQ96IW7 307 aa16.01■□□□□ 0.15
RPUSD3-210ENST00000460909 MS4A10Q96PG2 267 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms