RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 SLC25A42Q86VD7 318 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 VSTM2AQ8TAG5 236 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 SEC22AQ96IW7 307 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 OR51J1Q9H342 316 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 NUDT15Q9NV35 164 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 BET1LQ9NYM9 111 aa18.97■□□□□ 0.63
CPSF4-207ENST00000451876 TRAV3A0A0B4J244 114 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 HAX1O00165 279 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 ATP6V0E1O15342 81 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 KCNAB3O43448 404 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 B3GALNT1O75752 331 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 ANXA7P20073 488 aaKnown RBP18.96■□□□□ 0.63
CPSF4-207ENST00000451876 GNB1P62873 340 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 PPP1R1AQ13522 171 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 TMEM167AQ8TBQ9 72 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 PARP11Q9NR21 331 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 TET2Q6N021 2002 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-207ENST00000451876 TRAV6A0A075B6T7 132 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 A0A1B0GUS0 222 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 CDS2O95674 445 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 IL6RP08887 468 aaPredicted RBP18.96■□□□□ 0.63
CPSF4-207ENST00000451876 ERVK-16P61578 105 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 TMEM187Q14656 261 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 ZNF562Q6V9R5 426 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 NRARPQ7Z6K4 114 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 AIFM2Q9BRQ8 373 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 FAM103A1Q9BTL3 118 aaKnown RBP18.96■□□□□ 0.63
CPSF4-207ENST00000451876 WNT10AQ9GZT5 417 aa18.96■□□□□ 0.63
CPSF4-207ENST00000451876 IGKV1-5P01602 117 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 VAMP1P23763 118 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 DEFA1P59665 94 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 DEFA3P59666 94 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 FOXRED2Q8IWF2 684 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 KLHDC1Q8N7A1 406 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 ENKURQ8TC29 256 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 KCNIP3Q9Y2W7 256 aa18.95■□□□□ 0.62
CPSF4-207ENST00000451876 AP4M1O00189 453 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 FXYD3Q14802 87 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 TNXAQ16473 311 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 C10orf55Q5SWW7 151 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 C10orf99Q6UWK7 81 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 STPG2Q8N412 459 aa18.94■□□□□ 0.62
CPSF4-207ENST00000451876 IGF1P05019 195 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 OR9G9P0C7N8 305 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 EGR2P11161 476 aaPredicted RBP18.93■□□□□ 0.62
CPSF4-207ENST00000451876 MYOD1P15172 320 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 MMD2Q8IY49 270 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 GRPEL2Q8TAA5 225 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 WFDC12Q8WWY7 111 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 ARPC1AQ92747 370 aa18.93■□□□□ 0.62
CPSF4-207ENST00000451876 UPK2O00526 184 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 CNIH1O95406 144 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 AKR1C2P52895 323 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 KRTAP10-3P60369 221 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 IZUMO4Q1ZYL8 232 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 TMEM268Q5VZI3 342 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 SELENOHQ8IZQ5 122 aaKnown RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 OR4A5Q8NH83 315 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 WIPF2Q8TF74 440 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 RBPMSQ93062 196 aaKnown RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 TMEM56Q96MV1 263 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 NSG2Q9Y328 171 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 TMEM56-RWDD3S4R434 201 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 A0A0G2JRQ6 117 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 G3V318 75 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 CREBL2O60519 120 aaPredicted RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 SFT2D2O95562 160 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 OR4E1P0C645 316 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 P0C879 139 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 UBE2MP61081 183 aaKnown RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 RPL8P62917 257 aaKnown RBP18.92■□□□□ 0.62
CPSF4-207ENST00000451876 ABHD5Q8WTS1 349 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 CASTOR1Q8WTX7 329 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 WSB1Q9Y6I7 421 aa18.92■□□□□ 0.62
CPSF4-207ENST00000451876 HLA-AP01891 365 aaKnown RBP18.91■□□□□ 0.62
CPSF4-207ENST00000451876 ANXA3P12429 323 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 SRSF4Q08170 494 aaKnown RBP18.91■□□□□ 0.62
CPSF4-207ENST00000451876 ANKRD55Q3KP44 614 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 ZNF329Q86UD4 541 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 ZNF695Q8IW36 515 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 DUSP18Q8NEJ0 188 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 SRSF12Q8WXF0 261 aaKnown RBP18.91■□□□□ 0.62
CPSF4-207ENST00000451876 NUBP2Q9Y5Y2 271 aa18.91■□□□□ 0.62
CPSF4-207ENST00000451876 C9orf170A2RU37 121 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 E7EUB6 86 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 OPN1MWP04001 364 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 OPN1MW2P0DN77 364 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 OPN1MW3P0DN78 364 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 RAB25P57735 213 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 OR2B8PP59922 312 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 DHRS2Q13268 280 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 ECSCRQ19T08 205 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 H2BFWTQ7Z2G1 175 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 SLC35G3Q8N808 338 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 SGMS2Q8NHU3 365 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 PALMDQ9NP74 551 aa18.9■□□□□ 0.62
CPSF4-207ENST00000451876 DBX1A6NMT0 343 aa18.89■□□□□ 0.62
CPSF4-207ENST00000451876 ACTL6BO94805 426 aa18.89■□□□□ 0.62
CPSF4-207ENST00000451876 H2AFB2P0C5Z0 115 aa18.89■□□□□ 0.62
CPSF4-207ENST00000451876 HLA-GP17693 338 aa18.89■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms