RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 MEGF8Q7Z7M0 2845 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 DISC1C4P0D8 188 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 RPLP1P05386 114 aaKnown RBP11.21□□□□□ -0.61
COL3A1-203ENST00000450867 MAS1LP35410 378 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 KLF9Q13886 244 aaPredicted RBP11.21□□□□□ -0.61
COL3A1-203ENST00000450867 KIAA0141Q14154 515 aaPredicted RBP11.21□□□□□ -0.61
COL3A1-203ENST00000450867 ECSCRQ19T08 205 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 PHLDA2Q53GA4 152 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 ASPHD1Q5U4P2 390 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 OR4A47Q6IF82 309 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 LINC00299Q6ZSB3 139 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 VKORC1L1Q8N0U8 176 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 LFNGQ8NES3 379 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 OR5M8Q8NGP6 311 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 OR4A5Q8NH83 315 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 PRRT1Q99946 306 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 SRRQ9GZT4 340 aa11.21□□□□□ -0.61
COL3A1-203ENST00000450867 H3BUA1 57 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 S1PR2O95136 353 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 CTSDP07339 412 aaPredicted RBP11.2□□□□□ -0.62
COL3A1-203ENST00000450867 PYDC2Q56P42 97 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 FAAP20Q6NZ36 180 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 UNQ5815/PRO19632Q6UWF5 114 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 TBC1D26Q86UD7 250 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 GRPEL2Q8TAA5 225 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 ZFAND1Q8TCF1 268 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
COL3A1-203ENST00000450867 R3HDM4Q96D70 268 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 UBE2E2Q96LR5 201 aa11.2□□□□□ -0.62
COL3A1-203ENST00000450867 FAM103A1Q9BTL3 118 aaKnown RBP11.2□□□□□ -0.62
COL3A1-203ENST00000450867 DNAH3Q8TD57 4116 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 A0A1W2PN81 502 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 MPPED1O15442 326 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 CNIH1O95406 144 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 PGAM2P15259 253 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 CHRNA7P36544 502 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 RAB9AP51151 201 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 PPP5CP53041 499 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 AP3S2P59780 193 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 RUNX1Q01196 453 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 TNXAQ16473 311 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 SCGB2B2Q4G0G5 96 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 ETV3LQ6ZN32 361 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 ZNF695Q8IW36 515 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 ZNF491Q8N8L2 437 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 GDPD1Q8N9F7 314 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 OR51S1Q8NGJ8 323 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 OR13C8Q8NGS7 320 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 MARCH1Q8TCQ1 289 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 ABHD5Q8WTS1 349 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 KLK15Q9H2R5 256 aa11.19□□□□□ -0.62
COL3A1-203ENST00000450867 A0A1W2PRX2 142 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 MARCH11A6NNE9 402 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 H0Y980 276 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 B3GALNT1O75752 331 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 RPA2P15927 270 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 LPAR6P43657 344 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 PIGPP57054 158 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 GNB1P62873 340 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 RPL8P62917 257 aaKnown RBP11.18□□□□□ -0.62
COL3A1-203ENST00000450867 KHDC1LQ5JSQ8 128 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 LCNL1Q6ZST4 164 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 WFDC9Q8NEX5 89 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 FAM110DQ8TAY7 271 aaPredicted RBP11.18□□□□□ -0.62
COL3A1-203ENST00000450867 C4orf3Q8WVX3 66 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 SDHCQ99643 169 aaPredicted RBP11.18□□□□□ -0.62
COL3A1-203ENST00000450867 SPIN2AQ99865 258 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 SPIN2BQ9BPZ2 258 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 SLA2Q9H6Q3 261 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 TMEM140Q9NV12 185 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 SCP2D1Q9UJQ7 156 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 GPR132Q9UNW8 380 aa11.18□□□□□ -0.62
COL3A1-203ENST00000450867 MSGN1A6NI15 193 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 TEX22C9J3V5 150 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 UPK2O00526 184 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 ACTL6BO94805 426 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 IGKV1-39P01597 117 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 IGKV1D-39P04432 117 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 PF4V1P10720 104 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 HLA-GP17693 338 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 PI3P19957 117 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 FAUP35544 74 aaKnown RBP11.17□□□□□ -0.62
COL3A1-203ENST00000450867 ZNF45Q02386 682 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 TMEM65Q6PI78 240 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 C18orf65Q6ZTR6 163 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 SSX9Q7RTT3 188 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 TOMM5Q8N4H5 51 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 CCDC71LQ8N9Z2 235 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 KLHL30-AS1Q8NEE0 82 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 SEC22AQ96IW7 307 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 P2RX4Q99571 388 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 RTBDNQ9BSG5 229 aaPredicted RBP11.17□□□□□ -0.62
COL3A1-203ENST00000450867 C5orf66Q9H5L9 145 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 HRASLSQ9HDD0 168 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 BATF3Q9NR55 127 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
COL3A1-203ENST00000450867 A0A1B0GW64 132 aa11.16□□□□□ -0.62
COL3A1-203ENST00000450867 I3L521 148 aa11.16□□□□□ -0.62
COL3A1-203ENST00000450867 UCP1P25874 307 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms