RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GPR179Q6PRD1 2367 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 TECTAO75443 2155 aa16.1■□□□□ 0.17
HMGA1-205ENST00000447654 TRGV10A0A0A0MS01 117 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 MUC21A0A0G2JKD1 596 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 MUC21A0A140T8X8 626 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 TRAPPC2LH3BP13 241 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 CRXO43186 299 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 IGKV1-39P01597 117 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 IGKV1-5P01602 117 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 IGKV1D-39P04432 117 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 SCGB2A2Q13296 93 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 RSPO1Q2MKA7 263 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 MUC21Q5SSG8 566 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 BHLHA15Q7RTS1 189 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 OXGR1Q96P68 337 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 CNTRLQ7Z7A1 2325 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 LOC102724200A0A096LPH7 203 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 SLC17A3O00476 420 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 EFNA2O43921 213 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 OR7C1O76099 320 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 CRYBB3P26998 211 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 GDF1P27539 372 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 SEC11AP67812 179 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 RELBQ01201 579 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 HIST1H1AQ02539 215 aaPredicted RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 C17orf67Q0P5P2 114 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 PSG7Q13046 419 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 FAM162BQ5T6X4 162 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 OR8I2Q8N0Y5 310 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 SGCZQ96LD1 299 aa16.09■□□□□ 0.17
HMGA1-205ENST00000447654 LIN7CQ9NUP9 197 aaKnown RBP16.09■□□□□ 0.17
HMGA1-205ENST00000447654 SDK2Q58EX2 2172 aa16.08■□□□□ 0.17
HMGA1-205ENST00000447654 EML6Q6ZMW3 1958 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 TRAV8-6A0A0B4J262 113 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 PMS2P5A8MQ11 134 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 CLDN1O95832 211 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 DUSP3P51452 185 aaPredicted RBP16.08■□□□□ 0.16
HMGA1-205ENST00000447654 KLF5Q13887 457 aaPredicted RBP16.08■□□□□ 0.16
HMGA1-205ENST00000447654 C10orf128Q5T292 105 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 C5orf17Q8NAS9 161 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 TMEM38BQ9NVV0 291 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 NCOR1O75376 2440 aa16.08■□□□□ 0.16
HMGA1-205ENST00000447654 C2orf70A6NJV1 201 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 K7EN84 100 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 TNFSF11O14788 317 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 NTF3P20783 257 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 Q56UQ5 140 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 SLC25A53Q5H9E4 307 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 FAM19A2Q8N3H0 131 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 GP6Q9HCN6 339 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 OSTCQ9NRP0 149 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 TRBV6-6A0A0A6YYG2 114 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 HSBP1O75506 76 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 VAMP5O95183 116 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 CELA2AP08217 269 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 PTGDSP41222 190 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 C9orf135Q5VTT2 229 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 OR51H1Q8NH63 302 aa16.07■□□□□ 0.16
HMGA1-205ENST00000447654 EAF1Q96JC9 268 aaPredicted RBP16.07■□□□□ 0.16
HMGA1-205ENST00000447654 A0A1W2PPV4 95 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 CXorf1O96002 111 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 PPIAL4GP0DN37 164 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 EBLN2Q6P2I7 272 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 PCSK4Q6UW60 755 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 ERASQ7Z444 233 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 WFDC8Q8IUA0 241 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 ZDHHC23Q8IYP9 409 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 C18orf32Q8TCD1 76 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 PMCHL2Q9BQD1 86 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 TMEM70Q9BUB7 260 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 IGKV1-6A0A0C4DH72 117 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 SCO2A0A1W2PP80 73 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 APCSP02743 223 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 DAZAP2Q15038 168 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-205ENST00000447654 IZUMO4Q1ZYL8 232 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 MRPL14Q6P1L8 145 aaKnown RBP16.06■□□□□ 0.16
HMGA1-205ENST00000447654 OR5A2Q8NGI9 324 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 WIPF2Q8TF74 440 aaPredicted RBP16.06■□□□□ 0.16
HMGA1-205ENST00000447654 RNF138Q8WVD3 245 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 MS4A6AQ9H2W1 248 aa16.06■□□□□ 0.16
HMGA1-205ENST00000447654 NPIPB11E5RHQ5 1161 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 M0R2Z0 102 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 MT-CO2P00403 227 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 CCL4P13236 92 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 TFF3Q07654 80 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 CARD17Q5XLA6 110 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 OR1K1Q8NGR3 316 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 ATP6V0BQ99437 205 aa16.05■□□□□ 0.16
HMGA1-205ENST00000447654 H3BML4 177 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 MPDU1O75352 247 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 STAG3L2P0CL84 134 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 STAG3L3P0CL85 134 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 OR1L1Q8NH94 360 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 ABI3Q9P2A4 366 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 ARL2-SNX15V9GYD0 113 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 ZNF816-ZNF321PA0A0X1KG74 233 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 CELA3BP08861 270 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 FRMD6-AS1P0C7T7 363 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 AREGP15514 252 aa16.04■□□□□ 0.16
HMGA1-205ENST00000447654 ZNF718Q3SXZ3 478 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms