RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 CDS2O95674 445 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 KRASP01116 189 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 TCRBP04435 133 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 MAS1LP35410 378 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 MRGPRG-AS1Q2M3A8 158 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 SP6Q3SY56 376 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 SSX9Q7RTT3 188 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 CHPT1Q8WUD6 406 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 SEC22AQ96IW7 307 aa14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 ALX4Q9H161 411 aaPredicted RBP14.3□□□□□ -0.12
CDC42EP1-203ENST00000430687 LINC01548A6NM66 108 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 IGKV1-39P01597 117 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 IGKV1D-39P04432 117 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 CRIP2P52943 208 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 SUPT4H1P63272 117 aaKnown RBP14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 SRPXP78539 464 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 FXYD3Q14802 87 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 TRIM16LQ309B1 348 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 IL22RA2Q969J5 263 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 TMEM56Q96MV1 263 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 PALMDQ9NP74 551 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 TMEM140Q9NV12 185 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 TMEM56-RWDD3S4R434 201 aa14.29□□□□□ -0.12
CDC42EP1-203ENST00000430687 UPK2O00526 184 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 ACTL6BO94805 426 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 CNIH1O95406 144 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 G6PCP35575 357 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 PJVKQ0ZLH3 352 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 ATRQ13535 2644 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 TMEM187Q14656 261 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 TMEM95Q3KNT9 176 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 C12orf54Q6X4T0 127 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 STPG2Q8N412 459 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 KLHDC1Q8N7A1 406 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 DUSP18Q8NEJ0 188 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 ARPC1AQ92747 370 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 RBPMSQ93062 196 aaKnown RBP14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 C20orf85Q9H1P6 137 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 FLVCR2Q9UPI3 526 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 NUBP2Q9Y5Y2 271 aa14.28□□□□□ -0.12
CDC42EP1-203ENST00000430687 ARPC1BO15143 372 aaKnown RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 ATP6V0E1O15342 81 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 RPL8P62917 257 aaKnown RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 SLC35B1P78383 322 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 SSBP2P81877 361 aaPredicted RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 TMEM267Q0VDI3 215 aaPredicted RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 TNXAQ16473 311 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 H2BFWTQ7Z2G1 175 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 CENPVQ7Z7K6 275 aaPredicted RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 ZNF695Q8IW36 515 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 FAM219AQ8IW50 185 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 SGMS2Q8NHU3 365 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 ENKURQ8TC29 256 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 WIPF2Q8TF74 440 aaPredicted RBP14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 TMEM68Q96MH6 324 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 PARP11Q9NR21 331 aa14.27□□□□□ -0.13
CDC42EP1-203ENST00000430687 HAX1O00165 279 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 SNAPC5O75971 98 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 SFT2D2O95562 160 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 EGR2P11161 476 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 HLA-GP17693 338 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 VDAC1P21796 283 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 VAMP1P23763 118 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 MECP2P51608 486 aaKnown RBP14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 GNB1P62873 340 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 NDPQ00604 133 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 PPP1R1AQ13522 171 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 AKIRIN2Q53H80 203 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 LGI3Q8N145 548 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 WFDC12Q8WWY7 111 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 RRNAD1Q96FB5 475 aaKnown RBP14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 NOL4LQ96MY1 436 aaPredicted RBP14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 ZNF747Q9BV97 191 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 NUDT15Q9NV35 164 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 FKBP11Q9NYL4 201 aa14.26□□□□□ -0.13
CDC42EP1-203ENST00000430687 TRAV41A0A0B4J266 112 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 PSMB11A5LHX3 300 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 OR4E1P0C645 316 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 P0C879 139 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 AKR1C2P52895 323 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 TMEM268Q5VZI3 342 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 SELENOHQ8IZQ5 122 aaKnown RBP14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 COMMD1Q8N668 190 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 LRTM2Q8N967 370 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 SRSF12Q8WXF0 261 aaKnown RBP14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 SPIN2AQ99865 258 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 SPIN2BQ9BPZ2 258 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 PRNDQ9UKY0 176 aa14.25□□□□□ -0.13
CDC42EP1-203ENST00000430687 DUXBA0A1W2PPF3 345 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 C9orf170A2RU37 121 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 IGKV1-5P01602 117 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 H2AFB2P0C5Z0 115 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 ANXA7P20073 488 aaKnown RBP14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 CFHR3Q02985 330 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 C19orf54Q5BKX5 351 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 NRARPQ7Z6K4 114 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 MINDY2Q8NBR6 621 aa14.24□□□□□ -0.13
CDC42EP1-203ENST00000430687 SPATA3Q8NHX4 192 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms