RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SSX9Q7RTT3 188 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 OR51S1Q8NGJ8 323 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 GRPEL2Q8TAA5 225 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 VSTM2AQ8TAG5 236 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 ABHD5Q8WTS1 349 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 KLK15Q9H2R5 256 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 FAM212BQ9NTI7 297 aaPredicted RBP17.47■□□□□ 0.39
PTCD3-203ENST00000409783 ZFP57Q9NU63 452 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 BET1LQ9NYM9 111 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 COMMD9Q9P000 198 aa17.47■□□□□ 0.39
PTCD3-203ENST00000409783 MPPED1O15442 326 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 CNIH1O95406 144 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 NQO2P16083 231 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 TMEM267Q0VDI3 215 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-203ENST00000409783 KIAA0141Q14154 515 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-203ENST00000409783 TNXAQ16473 311 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 UNQ5815/PRO19632Q6UWF5 114 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 MMD2Q8IY49 270 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 ZFAND1Q8TCF1 268 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 PRRT1Q99946 306 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 HRASLSQ9HDD0 168 aa17.46■□□□□ 0.39
PTCD3-203ENST00000409783 FOXA2Q9Y261 457 aaPredicted RBP17.46■□□□□ 0.39
PTCD3-203ENST00000409783 A0A1W2PN81 502 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 CTSDP07339 412 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-203ENST00000409783 S100GP29377 79 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 CHRNA7P36544 502 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 PIGPP57054 158 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 SURF2Q15527 256 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-203ENST00000409783 BAK1Q16611 211 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 CXorf66Q5JRM2 361 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-203ENST00000409783 C10orf55Q5SWW7 151 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 GDPD1Q8N9F7 314 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 SRSF12Q8WXF0 261 aaKnown RBP17.45■□□□□ 0.38
PTCD3-203ENST00000409783 R3HDM4Q96D70 268 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 AIFM2Q9BRQ8 373 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 RTBDNQ9BSG5 229 aaPredicted RBP17.45■□□□□ 0.38
PTCD3-203ENST00000409783 GPR132Q9UNW8 380 aa17.45■□□□□ 0.38
PTCD3-203ENST00000409783 TRAV3A0A0B4J244 114 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 CREBL2O60519 120 aaPredicted RBP17.44■□□□□ 0.38
PTCD3-203ENST00000409783 IGKV1-39P01597 117 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 IGKV1D-39P04432 117 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 ECI1P42126 302 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 KHDC1LQ5JSQ8 128 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 TOMM5Q8N4H5 51 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 FAM110DQ8TAY7 271 aaPredicted RBP17.44■□□□□ 0.38
PTCD3-203ENST00000409783 C5orf66Q9H5L9 145 aa17.44■□□□□ 0.38
PTCD3-203ENST00000409783 MSGN1A6NI15 193 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 AP3S2P59780 193 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 CADM3Q8N126 398 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 OR4A5Q8NH83 315 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 BATF3Q9NR55 127 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 TMEM140Q9NV12 185 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 MCUBQ9NWR8 336 aa17.43■□□□□ 0.38
PTCD3-203ENST00000409783 A0A1B0GW64 132 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 MARCH11A6NNE9 402 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 E7EUB6 86 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 UPK2O00526 184 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 PF4V1P10720 104 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 MAS1LP35410 378 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 CDX1P47902 265 aaPredicted RBP17.42■□□□□ 0.38
PTCD3-203ENST00000409783 RAB9AP51151 201 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 ZNF45Q02386 682 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 OR4F17Q8NGA8 305 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 OR5M8Q8NGP6 311 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 CASTOR1Q8WTX7 329 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 DEDD2Q8WXF8 326 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 TMEM68Q96MH6 324 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 OR4F4Q96R69 305 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 TP53RKQ96S44 253 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 AKIP1Q9NQ31 210 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 SCP2D1Q9UJQ7 156 aa17.42■□□□□ 0.38
PTCD3-203ENST00000409783 NBEAL1Q6ZS30 2694 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 H0Y980 276 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 MYOD1P15172 320 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 RPA2P15927 270 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 RPL8P62917 257 aaKnown RBP17.41■□□□□ 0.38
PTCD3-203ENST00000409783 ETV3LQ6ZN32 361 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 LINC00299Q6ZSB3 139 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 ZNF695Q8IW36 515 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 ZNF491Q8N8L2 437 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 DMBX1Q8NFW5 382 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 SEC22AQ96IW7 307 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 COPZ2Q9P299 210 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 FBN3Q75N90 2809 aa17.41■□□□□ 0.38
PTCD3-203ENST00000409783 CGB1A6NKQ9 187 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 TEX22C9J3V5 150 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 ACTL6BO94805 426 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 KRASP01116 189 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 HLA-GP17693 338 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 FAUP35544 74 aaKnown RBP17.4■□□□□ 0.38
PTCD3-203ENST00000409783 G6PCP35575 357 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 C8orf86Q6ZUL3 223 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 CCDC71LQ8N9Z2 235 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 KLHL30-AS1Q8NEE0 82 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 OR5T1Q8NG75 326 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 C14orf166Q9Y224 244 aaKnown RBP17.4■□□□□ 0.38
PTCD3-203ENST00000409783 VSIG4Q9Y279 399 aa17.4■□□□□ 0.38
PTCD3-203ENST00000409783 C3orf85A0A1B0GTC6 90 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 FGF2P09038 288 aa17.39■□□□□ 0.37
PTCD3-203ENST00000409783 APELAP0DMC3 54 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms