RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 C20orf85Q9H1P6 137 aa23.15■■□□□ 1.3
USP42-202ENST00000404008 OR51J1Q9H342 316 aa23.15■■□□□ 1.3
USP42-202ENST00000404008 ZNF430Q9H8G1 570 aaPredicted RBP23.15■■□□□ 1.3
USP42-202ENST00000404008 TMEM140Q9NV12 185 aa23.15■■□□□ 1.3
USP42-202ENST00000404008 ARPC1BO15143 372 aaKnown RBP23.14■■□□□ 1.3
USP42-202ENST00000404008 DEFA1P59665 94 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 DEFA3P59666 94 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 NDPQ00604 133 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 TRIM16LQ309B1 348 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 SEC22AQ96IW7 307 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 WNT10AQ9GZT5 417 aa23.14■■□□□ 1.3
USP42-202ENST00000404008 AP4M1O00189 453 aa23.14■■□□□ 1.29
USP42-202ENST00000404008 CREBL2O60519 120 aaPredicted RBP23.14■■□□□ 1.29
USP42-202ENST00000404008 CDS2O95674 445 aa23.14■■□□□ 1.29
USP42-202ENST00000404008 IL6RP08887 468 aaPredicted RBP23.14■■□□□ 1.29
USP42-202ENST00000404008 UBE2MP61081 183 aaKnown RBP23.14■■□□□ 1.29
USP42-202ENST00000404008 CADM3Q8N126 398 aa23.14■■□□□ 1.29
USP42-202ENST00000404008 OR4A5Q8NH83 315 aa23.14■■□□□ 1.29
USP42-202ENST00000404008 IGF1P05019 195 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 GNB1P62873 340 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 TMEM187Q14656 261 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 MMD2Q8IY49 270 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 LHFPL5Q8TAF8 219 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 NOL4LQ96MY1 436 aaPredicted RBP23.13■■□□□ 1.29
USP42-202ENST00000404008 PARP11Q9NR21 331 aa23.13■■□□□ 1.29
USP42-202ENST00000404008 TNCP24821 2201 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 ATP6V0E1O15342 81 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 PPP1R1AQ13522 171 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 KLHDC1Q8N7A1 406 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 ENKURQ8TC29 256 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 TMEM56Q96MV1 263 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 NUDT15Q9NV35 164 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 LINC00527Q9UJ94 153 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 ZNF580Q9UK33 172 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 FBXO7Q9Y3I1 522 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 TMEM56-RWDD3S4R434 201 aa23.12■■□□□ 1.29
USP42-202ENST00000404008 HAX1O00165 279 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 ANXA3P12429 323 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 ANXA7P20073 488 aaKnown RBP23.11■■□□□ 1.29
USP42-202ENST00000404008 VAMP1P23763 118 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 FXYD3Q14802 87 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 STPG2Q8N412 459 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 WFDC12Q8WWY7 111 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 ARPC1AQ92747 370 aa23.11■■□□□ 1.29
USP42-202ENST00000404008 STAB1Q9NY15 2570 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 TRAV3A0A0B4J244 114 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 UPK2O00526 184 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 CNIH1O95406 144 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 IGKV1-5P01602 117 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 TNXAQ16473 311 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 NRARPQ7Z6K4 114 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 WIPF2Q8TF74 440 aaPredicted RBP23.1■■□□□ 1.29
USP42-202ENST00000404008 PRR13Q9NZ81 148 aa23.1■■□□□ 1.29
USP42-202ENST00000404008 TRAV6A0A075B6T7 132 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 ATG12O94817 140 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 EGR2P11161 476 aaPredicted RBP23.09■■□□□ 1.29
USP42-202ENST00000404008 RPL8P62917 257 aaKnown RBP23.09■■□□□ 1.29
USP42-202ENST00000404008 SELENOHQ8IZQ5 122 aaKnown RBP23.09■■□□□ 1.29
USP42-202ENST00000404008 ABHD5Q8WTS1 349 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 CHPT1Q8WUD6 406 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 RBPMSQ93062 196 aaKnown RBP23.09■■□□□ 1.29
USP42-202ENST00000404008 PALMDQ9NP74 551 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 NUBP2Q9Y5Y2 271 aa23.09■■□□□ 1.29
USP42-202ENST00000404008 ACTL6BO94805 426 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 SFT2D2O95562 160 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 FGF2P09038 288 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 OR4E1P0C645 316 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 MAS1LP35410 378 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 CRIP2P52943 208 aaPredicted RBP23.08■■□□□ 1.29
USP42-202ENST00000404008 TMEM268Q5VZI3 342 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 C12orf54Q6X4T0 127 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 H2BFWTQ7Z2G1 175 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 ZNF695Q8IW36 515 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 DUSP18Q8NEJ0 188 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 SGMS2Q8NHU3 365 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 GRPEL2Q8TAA5 225 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 IL22RA2Q969J5 263 aa23.08■■□□□ 1.29
USP42-202ENST00000404008 FAM103A1Q9BTL3 118 aaKnown RBP23.08■■□□□ 1.29
USP42-202ENST00000404008 OR9G9P0C7N8 305 aa23.07■■□□□ 1.28
USP42-202ENST00000404008 P0C879 139 aa23.07■■□□□ 1.28
USP42-202ENST00000404008 HLA-GP17693 338 aa23.07■■□□□ 1.28
USP42-202ENST00000404008 AKR1C2P52895 323 aa23.07■■□□□ 1.28
USP42-202ENST00000404008 SRPXP78539 464 aa23.07■■□□□ 1.28
USP42-202ENST00000404008 CENPVQ7Z7K6 275 aaPredicted RBP23.07■■□□□ 1.28
USP42-202ENST00000404008 ALX4Q9H161 411 aaPredicted RBP23.07■■□□□ 1.28
USP42-202ENST00000404008 ANK2Q01484 3957 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 C9orf170A2RU37 121 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 H2AFB2P0C5Z0 115 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 KRTAP10-3P60369 221 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 C10orf55Q5SWW7 151 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 SRSF12Q8WXF0 261 aaKnown RBP23.06■■□□□ 1.28
USP42-202ENST00000404008 GON7Q9BXV9 100 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 WSB1Q9Y6I7 421 aa23.06■■□□□ 1.28
USP42-202ENST00000404008 TRAV41A0A0B4J266 112 aa23.05■■□□□ 1.28
USP42-202ENST00000404008 G3V318 75 aa23.05■■□□□ 1.28
USP42-202ENST00000404008 HLA-AP01891 365 aaKnown RBP23.05■■□□□ 1.28
USP42-202ENST00000404008 VDAC1P21796 283 aa23.05■■□□□ 1.28
USP42-202ENST00000404008 MECP2P51608 486 aaKnown RBP23.05■■□□□ 1.28
USP42-202ENST00000404008 CFHR3Q02985 330 aa23.05■■□□□ 1.28
USP42-202ENST00000404008 DHRS2Q13268 280 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms