RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 COMMD9Q9P000 198 aa19.93■□□□□ 0.78
TMEM55B-202ENST00000398020 MARCH11A6NNE9 402 aa19.92■□□□□ 0.78
TMEM55B-202ENST00000398020 G6PCP35575 357 aa19.92■□□□□ 0.78
TMEM55B-202ENST00000398020 SLC35B1P78383 322 aa19.92■□□□□ 0.78
TMEM55B-202ENST00000398020 CITED2Q99967 270 aaPredicted RBP19.92■□□□□ 0.78
TMEM55B-202ENST00000398020 CCDC32Q9BV29 185 aa19.92■□□□□ 0.78
TMEM55B-202ENST00000398020 TRAV41A0A0B4J266 112 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 TEX13DA0A0J9YY54 714 aaPredicted RBP19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 H0Y980 276 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 SERPINE2P07093 398 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 LFNGQ8NES3 379 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 TMEM167AQ8TBQ9 72 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 AIFM2Q9BRQ8 373 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 PALMDQ9NP74 551 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 TMEM140Q9NV12 185 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 TRAV3A0A0B4J244 114 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 IGKV1-39P01597 117 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 IGKV1D-39P04432 117 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 CD40LGP29965 261 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 C10orf55Q5SWW7 151 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 MMD2Q8IY49 270 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 OR4X2Q8NGF9 303 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 TMEM230Q96A57 120 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 SCGB3A2Q96PL1 93 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 GON7Q9BXV9 100 aa19.91■□□□□ 0.78
TMEM55B-202ENST00000398020 NAP1L6A6NFF2 107 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 PLA2G10O15496 165 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 APELAP0DMC3 54 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 AKR1C4P17516 323 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 ERVK-16P61578 105 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 CFHR3Q02985 330 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 POU2AF1Q16633 256 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 LCNL1Q6ZST4 164 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 TMED4Q7Z7H5 227 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 SGMS2Q8NHU3 365 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 NAA60Q9H7X0 242 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 FAM212BQ9NTI7 297 aaPredicted RBP19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 BET1LQ9NYM9 111 aa19.9■□□□□ 0.78
TMEM55B-202ENST00000398020 TRRAPQ9Y4A5 3859 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 CENPXA8MT69 81 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 ACTL6BO94805 426 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 OR5AC1P0C628 307 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 MYOD1P15172 320 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 ZNF580Q9UK33 172 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 NUBP2Q9Y5Y2 271 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 VWFP04275 2813 aa19.89■□□□□ 0.77
TMEM55B-202ENST00000398020 TET2Q6N021 2002 aaPredicted RBP19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 CRYM-AS1A6NIL9 109 aa19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 CREBL2O60519 120 aaPredicted RBP19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 PPIFP30405 207 aaKnown RBP19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 BTCP35070 178 aa19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 KHDC1LQ5JSQ8 128 aa19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 UNQ5815/PRO19632Q6UWF5 114 aa19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 SRSF12Q8WXF0 261 aaKnown RBP19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 SLC25A21Q9BQT8 299 aaPredicted RBP19.88■□□□□ 0.77
TMEM55B-202ENST00000398020 A0A1W2PN81 502 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 A0A1W2PRX2 142 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 MSGN1A6NI15 193 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 OPN1MWP04001 364 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 OPN1MW2P0DN77 364 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 OPN1MW3P0DN78 364 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 CHRNA7P36544 502 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 CRIP2P52943 208 aaPredicted RBP19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 CD83Q01151 205 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 TRIM16LQ309B1 348 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 C19orf54Q5BKX5 351 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 TEX38Q6PEX7 206 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 TCRBV4S1A1TA0A5B7 111 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 RPL8P62917 257 aaKnown RBP19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 RBMS2Q15434 407 aaKnown RBP19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 NSUN5P1Q3KNT7 163 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 CASTOR1Q8WTX7 329 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 SEC22AQ96IW7 307 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 PHB2Q99623 299 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 C7orf50Q9BRJ6 194 aaKnown RBP19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 NSG2Q9Y328 171 aa19.87■□□□□ 0.77
TMEM55B-202ENST00000398020 UPK2O00526 184 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 LYRM1O43325 122 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 SOX15O60248 233 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 IGHG4P01861 327 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 IL6RP08887 468 aaPredicted RBP19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 UCP1P25874 307 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 TMEM267Q0VDI3 215 aaPredicted RBP19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 SGPP2Q8IWX5 399 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 MINDY2Q8NBR6 621 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 OR4A5Q8NH83 315 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 PRR13Q9NZ81 148 aa19.86■□□□□ 0.77
TMEM55B-202ENST00000398020 E7EUB6 86 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 HLA-GP17693 338 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 AKIRIN2Q53H80 203 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 ASPHD1Q5U4P2 390 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 GLYATL2Q8WU03 294 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 TMEM222Q9H0R3 208 aa19.85■□□□□ 0.77
TMEM55B-202ENST00000398020 NDUFB6O95139 128 aa19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 RPLP1P05386 114 aaKnown RBP19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 OR9G9P0C7N8 305 aa19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 SUPT4H1P63272 117 aaKnown RBP19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 FLVCR2Q9UPI3 526 aa19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 PKD1L1Q8TDX9 2849 aa19.84■□□□□ 0.77
TMEM55B-202ENST00000398020 IZUMO4Q1ZYL8 232 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms