RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 RSG1Q9BU20 258 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 ZNRD1Q9P1U0 126 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 UBE2L5PA0A1B0GUS4 154 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF383Q8NA42 475 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 OR10A7Q8NGE5 316 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 TMEM140Q9NV12 185 aa9.97□□□□□ -0.81
ITGB1-202ENST00000396033 AKIRIN2Q53H80 203 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 ARG1P05089 322 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 S100PP25815 95 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 ZNF124Q15973 351 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 GUK1Q16774 197 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 HEPN1Q6WQI6 88 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 C20orf24Q9BUV8 137 aa9.96□□□□□ -0.81
ITGB1-202ENST00000396033 EIF5A2Q9GZV4 153 aaKnown RBP9.96□□□□□ -0.81
ITGB1-202ENST00000396033 CXorf65A6NEN9 183 aa9.96□□□□□ -0.82
ITGB1-202ENST00000396033 RPS16P62249 146 aaKnown RBP9.96□□□□□ -0.82
ITGB1-202ENST00000396033 LRRC75BQ2VPJ9 315 aa9.96□□□□□ -0.82
ITGB1-202ENST00000396033 LFNGQ8NES3 379 aa9.96□□□□□ -0.82
ITGB1-202ENST00000396033 KAAG1Q9UBP8 84 aa9.96□□□□□ -0.82
ITGB1-202ENST00000396033 HCFC1P51610 2035 aa9.96□□□□□ -0.82
ITGB1-202ENST00000396033 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 C15orf54Q8N8G6 183 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 TRAV3A0A0B4J244 114 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 LOXP28300 417 aaPredicted RBP9.95□□□□□ -0.82
ITGB1-202ENST00000396033 WDR61Q9GZS3 305 aaKnown RBP9.95□□□□□ -0.82
ITGB1-202ENST00000396033 DMRT1Q9Y5R6 373 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 SPCS3P61009 180 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 RELBQ01201 579 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 AARDQ4LEZ3 155 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 GFI1BQ5VTD9 330 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 OR10P1Q8NGE3 313 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 PBDC1Q9BVG4 233 aa9.95□□□□□ -0.82
ITGB1-202ENST00000396033 DOCK11Q5JSL3 2073 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 TFF3Q07654 80 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 AWAT1Q58HT5 328 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 DPPA3Q6W0C5 159 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 RAB39BQ96DA2 213 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 TMEM204Q9BSN7 226 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 PSMG3Q9BT73 122 aaPredicted RBP9.94□□□□□ -0.82
ITGB1-202ENST00000396033 ITPR1Q14643 2758 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 COL8A2P25067 703 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 TLE4Q04727 773 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 PINX1Q96BK5 328 aaKnown RBP9.94□□□□□ -0.82
ITGB1-202ENST00000396033 TMEM147Q9BVK8 224 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 PARD6GQ9BYG4 376 aaPredicted RBP9.94□□□□□ -0.82
ITGB1-202ENST00000396033 CT45A6P0DMU7 189 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 CT45A5P0DMU8 189 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 CT45A7P0DMV0 189 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 RAB5BP61020 215 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 ATP6V1FQ16864 119 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 RTL8BQ17RB0 113 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 OR4A47Q6IF82 309 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 FAM24BQ8N5W8 94 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 TAF15Q92804 592 aaKnown RBP eCLIP9.94□□□□□ -0.82
ITGB1-202ENST00000396033 RBMXL1Q96E39 390 aaKnown RBP9.94□□□□□ -0.82
ITGB1-202ENST00000396033 SLC35D1Q9NTN3 355 aa9.94□□□□□ -0.82
ITGB1-202ENST00000396033 A0A1W2PPE2 198 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 PMS2P5A8MQ11 134 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 PPOXP50336 477 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 RNF212Q495C1 297 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 SPSB3Q6PJ21 355 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 OR52E5Q8NH55 327 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 TPRP12270 2363 aaKnown RBP9.93□□□□□ -0.82
ITGB1-202ENST00000396033 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 RAB5AP20339 215 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 ZNF833PQ6ZTB9 187 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 C7orf77A4D0Y5 90 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 BTBD17A6NE02 478 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 C15orf62A8K5M9 175 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 HRASP01112 189 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 CCL20P78556 96 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 HNF4GQ14541 408 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 OR10X1Q8NGY0 326 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 MRPL20Q9BYC9 149 aaKnown RBP9.93□□□□□ -0.82
ITGB1-202ENST00000396033 HIPK2Q9H2X6 1198 aa9.93□□□□□ -0.82
ITGB1-202ENST00000396033 HEYLQ9NQ87 328 aaPredicted RBP9.93□□□□□ -0.82
ITGB1-202ENST00000396033 S100A6P06703 90 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 ELLP55199 621 aaPredicted RBP9.92□□□□□ -0.82
ITGB1-202ENST00000396033 RAB2AP61019 212 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 RPP30P78346 268 aaKnown RBP9.92□□□□□ -0.82
ITGB1-202ENST00000396033 TMEM155Q4W5P6 130 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 OR13D1Q8NGV5 346 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 VSIRQ9H7M9 311 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 TCF19Q9Y242 345 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 IFNA10P01566 189 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 FGF7P21781 194 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 SERF2P84101 59 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 ZNF429Q86V71 674 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 ABCA4P78363 2273 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 C1orf196B1AJZ1 125 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 HBE1P02100 147 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 IGKV1-16P04430 117 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 SPNS3Q6ZMD2 512 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 SMCO4Q9NRQ5 59 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 RPRMQ9NS64 109 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 KPTNQ9Y664 436 aa9.92□□□□□ -0.82
ITGB1-202ENST00000396033 APOA2P02652 100 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 PAX1P15863 534 aa9.91□□□□□ -0.82
ITGB1-202ENST00000396033 REG1BP48304 166 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms