RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 A8MZ25 164 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 KBTBD11O94819 623 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 LYL1P12980 280 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 HAGHQ16775 308 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 IDNKQ5T6J7 187 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 OR4S2Q8NH73 311 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 FYTTD1Q96QD9 318 aaKnown RBP12.57□□□□□ -0.4
PTPRK-208ENST00000392449 CCL28Q9NRJ3 127 aa12.57□□□□□ -0.4
PTPRK-208ENST00000392449 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.56□□□□□ -0.4
PTPRK-208ENST00000392449 CREBL2O60519 120 aaPredicted RBP12.56□□□□□ -0.4
PTPRK-208ENST00000392449 AREGP15514 252 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 TATDN3Q17R31 274 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 LCN12Q6JVE5 192 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 ZNF773Q6PK81 442 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 PUSL1Q8N0Z8 303 aaKnown RBP12.56□□□□□ -0.4
PTPRK-208ENST00000392449 Q8N402 240 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 MFSD4AQ8N468 514 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 NECAP1Q8NC96 275 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 BEST4Q8NFU0 473 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 SECTM1Q8WVN6 248 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 OR2A7Q96R45 310 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 HSD17B10Q99714 261 aaKnown RBP12.56□□□□□ -0.4
PTPRK-208ENST00000392449 PLEKHA3Q9HB20 300 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 RETNQ9HD89 108 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
PTPRK-208ENST00000392449 REG1AP05451 166 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 FCGR2CP31995 323 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 TGFBR1P36897 503 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 RPL27AP46776 148 aaKnown RBP12.55□□□□□ -0.4
PTPRK-208ENST00000392449 MECP2P51608 486 aaKnown RBP12.55□□□□□ -0.4
PTPRK-208ENST00000392449 ARPC4P59998 168 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 NEDD8Q15843 81 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 CD300EQ496F6 205 aaPredicted RBP12.55□□□□□ -0.4
PTPRK-208ENST00000392449 GTSCR1Q86UQ5 136 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 TMEM167AQ8TBQ9 72 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 WFDC10AQ9H1F0 79 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 EDA2RQ9HAV5 297 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 PALMDQ9NP74 551 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 SIGLEC8Q9NYZ4 499 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 PEMTQ9UBM1 199 aa12.55□□□□□ -0.4
PTPRK-208ENST00000392449 MEIS3P1A6NDR6 274 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 SCGNO76038 276 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 SLC22A5O76082 557 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 NDUFB8O95169 186 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 OR13F1Q8NGS4 319 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 FANCD2OSQ96PS1 177 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 TUBA4BQ9H853 241 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 FBXL7Q9UJT9 491 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 ZNF257Q9Y2Q1 563 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 LYSTQ99698 3801 aa12.54□□□□□ -0.4
PTPRK-208ENST00000392449 CGB1A6NKQ9 187 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 OR2C1O95371 312 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 CD7P09564 240 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 ZNF735P0CB33 412 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 FXYD4P59646 89 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 CD81P60033 236 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 CACNG8Q8WXS5 425 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 Q9H521 79 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 DPPA5A6NC42 116 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 ZNF785A8K8V0 405 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 SULT1C2O00338 296 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 PPYP01298 95 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 CLEC19AQ6UXS0 136 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 ZNF66Q6ZN08 573 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 HOGA1Q86XE5 327 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 VSTM2AQ8TAG5 236 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 FAM110AQ9BQ89 295 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 SPATA25Q9BR10 227 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 SLC2A9Q9NRM0 540 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 ETV7Q9Y603 341 aa12.53□□□□□ -0.4
PTPRK-208ENST00000392449 TRAV3A0A0B4J244 114 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 C2orf70A6NJV1 201 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 NPIPB5A8MRT5 1133 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 FOLR2P14207 255 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 TIMM50Q3ZCQ8 353 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 OR4A47Q6IF82 309 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 SLC25A42Q86VD7 318 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 SPAG16Q8N0X2 631 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 DEFB125Q8N687 156 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 DYNLRB2Q8TF09 96 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 ISOC1Q96CN7 298 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 WDR89Q96FK6 387 aaPredicted RBP12.52□□□□□ -0.41
PTPRK-208ENST00000392449 NEURL2Q9BR09 285 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 YTHDF1Q9BYJ9 559 aaKnown RBP12.52□□□□□ -0.41
PTPRK-208ENST00000392449 SLC5A7Q9GZV3 580 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 AUNIPQ9H7T9 357 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 ZC4H2Q9NQZ6 224 aa12.52□□□□□ -0.41
PTPRK-208ENST00000392449 AIREO43918 545 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 RPA2P15927 270 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 HLA-GP17693 338 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 PSMB6P28072 239 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 RPL8P62917 257 aaKnown RBP12.51□□□□□ -0.41
PTPRK-208ENST00000392449 DEFB114Q30KQ6 69 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 ZNF818PQ6ZRF7 136 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 TMEM17Q86X19 198 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
PTPRK-208ENST00000392449 MFSD2BA6NFX1 497 aa12.5□□□□□ -0.41
PTPRK-208ENST00000392449 GGCTO75223 188 aaKnown RBP12.5□□□□□ -0.41
PTPRK-208ENST00000392449 HRASP01112 189 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 168.8 ms