RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 TMEM222Q9H0R3 208 aa11.77□□□□□ -0.52
SUMO1-203ENST00000392246 ACTL6BO94805 426 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ATG12O94817 140 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 CNIH1O95406 144 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 IGKV1-39P01597 117 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 IGKV1D-39P04432 117 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 IGF1P05019 195 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ANXA3P12429 323 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 G6PCP35575 357 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 DEFA1P59665 94 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 DEFA3P59666 94 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 UBE2MP61081 183 aaKnown RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 GNB1P62873 340 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 FXYD3Q14802 87 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 MRGPRG-AS1Q2M3A8 158 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 CENPVQ7Z7K6 275 aaPredicted RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 SLC25A42Q86VD7 318 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 STPG2Q8N412 459 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 KLHDC1Q8N7A1 406 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 NOL4LQ96MY1 436 aaPredicted RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ZNF430Q9H8G1 570 aaPredicted RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 PARP11Q9NR21 331 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM140Q9NV12 185 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ZNF580Q9UK33 172 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 FLVCR2Q9UPI3 526 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ATP6V0E1O15342 81 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 CDS2O95674 445 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 TCRBP04435 133 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 IL6RP08887 468 aaPredicted RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 MAS1LP35410 378 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 SUPT4H1P63272 117 aaKnown RBP11.76□□□□□ -0.53
SUMO1-203ENST00000392246 NDPQ00604 133 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 TNXAQ16473 311 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 C3orf56Q8N813 242 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ABHD5Q8WTS1 349 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 ARPC1AQ92747 370 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 SEC22AQ96IW7 307 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 GON7Q9BXV9 100 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 LINC00527Q9UJ94 153 aa11.76□□□□□ -0.53
SUMO1-203ENST00000392246 UPK2O00526 184 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 ARPC1BO15143 372 aaKnown RBP11.75□□□□□ -0.53
SUMO1-203ENST00000392246 RPL8P62917 257 aaKnown RBP11.75□□□□□ -0.53
SUMO1-203ENST00000392246 SSBP2P81877 361 aaPredicted RBP11.75□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM267Q0VDI3 215 aaPredicted RBP11.75□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM187Q14656 261 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 H2BFWTQ7Z2G1 175 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 ZNF695Q8IW36 515 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 SGMS2Q8NHU3 365 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 WFDC12Q8WWY7 111 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM56Q96MV1 263 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 C20orf85Q9H1P6 137 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM56-RWDD3S4R434 201 aa11.75□□□□□ -0.53
SUMO1-203ENST00000392246 PSMB11A5LHX3 300 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 SNAPC5O75971 98 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 FGF2P09038 288 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 VDAC1P21796 283 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 VAMP1P23763 118 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 CRIP2P52943 208 aaPredicted RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 SLC35B1P78383 322 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 SRPXP78539 464 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 PPP1R1AQ13522 171 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 SELENOHQ8IZQ5 122 aaKnown RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 GRPEL2Q8TAA5 225 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 ENKURQ8TC29 256 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 WIPF2Q8TF74 440 aaPredicted RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 RBPMSQ93062 196 aaKnown RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 FAM103A1Q9BTL3 118 aaKnown RBP11.74□□□□□ -0.53
SUMO1-203ENST00000392246 ZNF747Q9BV97 191 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 NUBP2Q9Y5Y2 271 aa11.74□□□□□ -0.53
SUMO1-203ENST00000392246 TRAV6A0A075B6T7 132 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 TRAV3A0A0B4J244 114 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 TRAV41A0A0B4J266 112 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 PIGBOS1A0A0B4J2F0 54 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 SFT2D2O95562 160 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 HLA-GP17693 338 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 AKR1C2P52895 323 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 AKIRIN2Q53H80 203 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 TMEM268Q5VZI3 342 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 OR5AU1Q8NGC0 362 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 LHFPL5Q8TAF8 219 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 SRSF12Q8WXF0 261 aaKnown RBP11.73□□□□□ -0.53
SUMO1-203ENST00000392246 IL22RA2Q969J5 263 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 RRNAD1Q96FB5 475 aaKnown RBP11.73□□□□□ -0.53
SUMO1-203ENST00000392246 ALX4Q9H161 411 aaPredicted RBP11.73□□□□□ -0.53
SUMO1-203ENST00000392246 NUDT15Q9NV35 164 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 WSB1Q9Y6I7 421 aa11.73□□□□□ -0.53
SUMO1-203ENST00000392246 G3V318 75 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 IGKV1-5P01602 117 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 OR4E1P0C645 316 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 OR9G9P0C7N8 305 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 ANXA7P20073 488 aaKnown RBP11.72□□□□□ -0.53
SUMO1-203ENST00000392246 ECSCRQ19T08 205 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 ZNF329Q86UD4 541 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 LGI3Q8N145 548 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 DUSP18Q8NEJ0 188 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 LFNGQ8NES3 379 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 SPATA3Q8NHX4 192 aa11.72□□□□□ -0.53
SUMO1-203ENST00000392246 RNASE11Q8TAA1 199 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms