RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 DHODHQ02127 395 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 PJVKQ0ZLH3 352 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM128Q5BJH2 165 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 TMED4Q7Z7H5 227 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 CENPSQ8N2Z9 138 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 DMBX1Q8NFW5 382 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 NOL4LQ96MY1 436 aaPredicted RBP11.83□□□□□ -0.52
HSPG2-201ENST00000374673 ZNF747Q9BV97 191 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM222Q9H0R3 208 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 ZNF430Q9H8G1 570 aaPredicted RBP11.83□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
HSPG2-201ENST00000374673 KRASP01116 189 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 FGF2P09038 288 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 G6PCP35575 357 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 SUPT4H1P63272 117 aaKnown RBP11.82□□□□□ -0.52
HSPG2-201ENST00000374673 FXYD3Q14802 87 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 SP6Q3SY56 376 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 MZT2BQ6NZ67 158 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 SGMS2Q8NHU3 365 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 GLYATL2Q8WU03 294 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 ARPC1AQ92747 370 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 GON7Q9BXV9 100 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 PARP11Q9NR21 331 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 LINC00527Q9UJ94 153 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 KCNIP3Q9Y2W7 256 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 FBXO7Q9Y3I1 522 aa11.82□□□□□ -0.52
HSPG2-201ENST00000374673 UPK2O00526 184 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 ATG12O94817 140 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 CDS2O95674 445 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TCRBP04435 133 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 EGR2P11161 476 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-201ENST00000374673 MAS1LP35410 378 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 KRTAP10-3P60369 221 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 UBE2MP61081 183 aaKnown RBP11.81□□□□□ -0.52
HSPG2-201ENST00000374673 CFHR3Q02985 330 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM187Q14656 261 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TNXAQ16473 311 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TRIM16LQ309B1 348 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 CENPVQ7Z7K6 275 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-201ENST00000374673 SLC25A42Q86VD7 318 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 C3orf56Q8N813 242 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TSC22D3Q99576 134 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 NUBP2Q9Y5Y2 271 aa11.81□□□□□ -0.52
HSPG2-201ENST00000374673 TNCP24821 2201 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 TRAV41A0A0B4J266 112 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 PSMB11A5LHX3 300 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 ACTL6BO94805 426 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 CNIH1O95406 144 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 ANXA3P12429 323 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 VDAC1P21796 283 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 GNB1P62873 340 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 RPL8P62917 257 aaKnown RBP11.8□□□□□ -0.52
HSPG2-201ENST00000374673 SLC35B1P78383 322 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 C19orf54Q5BKX5 351 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 LHFPL5Q8TAF8 219 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 ABHD5Q8WTS1 349 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 SRSF12Q8WXF0 261 aaKnown RBP11.8□□□□□ -0.52
HSPG2-201ENST00000374673 RBPMSQ93062 196 aaKnown RBP11.8□□□□□ -0.52
HSPG2-201ENST00000374673 IL22RA2Q969J5 263 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM56Q96MV1 263 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 CITED1Q99966 193 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 FAM103A1Q9BTL3 118 aaKnown RBP11.8□□□□□ -0.52
HSPG2-201ENST00000374673 C20orf85Q9H1P6 137 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 FLVCR2Q9UPI3 526 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM56-RWDD3S4R434 201 aa11.8□□□□□ -0.52
HSPG2-201ENST00000374673 TRAV3A0A0B4J244 114 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 FAM240BA0A1B0GVZ2 78 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 G3V318 75 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 SFT2D2O95562 160 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 OR9G9P0C7N8 305 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 HLA-GP17693 338 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 PPIFP30405 207 aaKnown RBP11.79□□□□□ -0.52
HSPG2-201ENST00000374673 AKR1C2P52895 323 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 DEFA1P59665 94 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 DEFA3P59666 94 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM267Q0VDI3 215 aaPredicted RBP11.79□□□□□ -0.52
HSPG2-201ENST00000374673 PPP1R1AQ13522 171 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 AKIRIN2Q53H80 203 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 C10orf99Q6UWK7 81 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 H2BFWTQ7Z2G1 175 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 SELENOHQ8IZQ5 122 aaKnown RBP11.79□□□□□ -0.52
HSPG2-201ENST00000374673 COMMD1Q8N668 190 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 OR5AU1Q8NGC0 362 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 GRPEL2Q8TAA5 225 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM68Q96MH6 324 aa11.79□□□□□ -0.52
HSPG2-201ENST00000374673 TET2Q6N021 2002 aaPredicted RBP11.78□□□□□ -0.52
HSPG2-201ENST00000374673 FBXO24O75426 580 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 P0C879 139 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 VAMP1P23763 118 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 RPL27AP46776 148 aaKnown RBP11.78□□□□□ -0.52
HSPG2-201ENST00000374673 SRPXP78539 464 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 ECSCRQ19T08 205 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 C10orf55Q5SWW7 151 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 TMEM268Q5VZI3 342 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 UNQ5815/PRO19632Q6UWF5 114 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 SHISA2Q6UWI4 295 aa11.78□□□□□ -0.52
HSPG2-201ENST00000374673 ZNF329Q86UD4 541 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms