RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 F2RL2O00254 374 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 RAB29O14966 203 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 IFNA4P05014 189 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 HOXA1P49639 335 aaPredicted RBP11.28□□□□□ -0.6
LSS-201ENST00000356396 BLOC1S1P78537 153 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 HTD2P86397 168 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 STX12Q86Y82 276 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 CCDC28AQ8IWP9 274 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 MARC2Q969Z3 335 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 HARBI1Q96MB7 349 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 PLEKHA2Q9HB19 425 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 A0A1B0GU03 582 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 JTBO76095 146 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 SAA1P0DJI8 122 aaPredicted RBP11.28□□□□□ -0.6
LSS-201ENST00000356396 RPL23AP62750 156 aaKnown RBP11.28□□□□□ -0.6
LSS-201ENST00000356396 LRRC46Q96FV0 321 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 RPRMQ9NS64 109 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 WNK1Q9H4A3 2382 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 NOTCH3Q9UM47 2321 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 LOC105371267A0A1B0GV96 52 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 TSPAN15O95858 294 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 TUBG1P23258 451 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 SRPXP78539 464 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 SSX2Q16385 188 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 ZNF841Q6ZN19 808 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 PERPQ96FX8 193 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
LSS-201ENST00000356396 FGF2P09038 288 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.27□□□□□ -0.61
LSS-201ENST00000356396 ACTL6BO94805 426 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 DANCRP0C864 163 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 IGHV1-8P0DP01 117 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 NPBWR1P48145 328 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 SSBP2P81877 361 aaPredicted RBP11.27□□□□□ -0.61
LSS-201ENST00000356396 OR5T1Q8NG75 326 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 CACFD1Q9UGQ2 172 aa11.27□□□□□ -0.61
LSS-201ENST00000356396 BORCS7-ASMTA0A0B4J1R7 106 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 FCN1O00602 326 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 RELBQ01201 579 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 RXFP4Q8TDU9 374 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 HSD17B10Q99714 261 aaKnown RBP11.26□□□□□ -0.61
LSS-201ENST00000356396 LINC00312Q9Y6C7 94 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 SELENOKQ9Y6D0 94 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 TOR1AO14656 332 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 SULT1A1P50225 295 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 GNB2P62879 340 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 KLF17Q5JT82 389 aaPredicted RBP11.26□□□□□ -0.61
LSS-201ENST00000356396 GPR157Q5UAW9 335 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 WDR25Q64LD2 544 aaPredicted RBP11.26□□□□□ -0.61
LSS-201ENST00000356396 ISOC2Q96AB3 205 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 PRELID3BQ9Y3B1 194 aa11.26□□□□□ -0.61
LSS-201ENST00000356396 J3QR06 171 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 SPP1P10451 314 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 UBE2G2P60604 165 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 ACSM6Q6P461 480 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 SLC25A48Q6ZT89 311 aaKnown RBP11.25□□□□□ -0.61
LSS-201ENST00000356396 PUSL1Q8N0Z8 303 aaKnown RBP11.25□□□□□ -0.61
LSS-201ENST00000356396 UBAC2Q8NBM4 344 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 GNG13Q9P2W3 67 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 TCF19Q9Y242 345 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 IGHV3OR16-8A0A075B7F1 116 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 HES1Q14469 280 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 CLEC12BQ2HXU8 276 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 DYNAPQ8N1N2 210 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 CD300LFQ8TDQ1 290 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
LSS-201ENST00000356396 TSNAXQ99598 290 aaKnown RBP11.25□□□□□ -0.61
LSS-201ENST00000356396 ZNF729A6NN14 1252 aaPredicted RBP11.25□□□□□ -0.61
LSS-201ENST00000356396 C15orf62A8K5M9 175 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 A8MXK9 166 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 FGF16O43320 207 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 FGF7P21781 194 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 SULT1A2P50226 295 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 KRTAP10-9P60411 292 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 ERVK-16P61578 105 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 DOK5Q9P104 306 aa11.25□□□□□ -0.61
LSS-201ENST00000356396 SFTA3P0C7M3 94 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 NQO2P16083 231 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 HEPN1Q6WQI6 88 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 DDB2Q92466 427 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 FBXL15Q9H469 300 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 TNFRSF19Q9NS68 423 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 CBLN4Q9NTU7 201 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 IGHV2-26A0A0B4J1V2 119 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 HPRT1P00492 218 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 F2RL1P55085 397 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 C3orf36Q3SXR2 165 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 MIC13Q5XKP0 118 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 FAM122CQ6P4D5 195 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 C1orf174Q8IYL3 243 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 ATP5SQ99766 215 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 HSPB7Q9UBY9 170 aa11.24□□□□□ -0.61
LSS-201ENST00000356396 IGHV3-35A0A0C4DH35 117 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 A0A1B0GW64 132 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 CA2P00918 260 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 IGHV2-70P01814 119 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 BRD3OSQ6XYD6 125 aa11.23□□□□□ -0.61
LSS-201ENST00000356396 OR2T6Q8NHC8 308 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms