RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TTC9CQ8N5M4 171 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 OR5AP2Q8NGF4 316 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 OR4S2Q8NH73 311 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 RSRP1Q9BUV0 290 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 FXYD6Q9H0Q3 95 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 RBM38Q9H0Z9 239 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 PEF1Q9UBV8 284 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 MRPS7Q9Y2R9 242 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 SMAD5-AS1Q9Y6J3 95 aa12.74□□□□□ -0.37
PDLIM7-201ENST00000355572 A0A0G2JLM5 398 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 MPPED1O15442 326 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 SLC22A5O76082 557 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 OR2A4O95047 310 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 CSN3P07498 182 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 EXOSC2Q13868 293 aaKnown RBP12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 TIMM50Q3ZCQ8 353 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 OR4A47Q6IF82 309 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 GIMAP1Q8WWP7 306 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 SLC25A46Q96AG3 418 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 FANCD2OSQ96PS1 177 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 OR2A7Q96R45 310 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 U3KQK5 164 aa12.73□□□□□ -0.37
PDLIM7-201ENST00000355572 PPP5D1E7EU14 171 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 NDUFB8O95169 186 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 IGHV3-23P01764 117 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 HLA-AP01891 365 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 PMP2P02689 132 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 REG1AP05451 166 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 FRMD6-AS1P0C7T7 363 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 ZNF735P0CB33 412 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 RPA2P15927 270 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 NAT1P18440 290 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 ZP3P21754 424 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 GNRHRP30968 328 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 RPL27AP46776 148 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 GPR141Q7Z602 305 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 LYSMD2Q8IV50 215 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 SPAG16Q8N0X2 631 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 OR9G4Q8NGQ1 327 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 OR6Q1Q8NGQ2 317 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 DGCR14Q96DF8 476 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 USMG5Q96IX5 58 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 WWC2-AS2Q96NR7 200 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 FYTTD1Q96QD9 318 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 THAP7Q9BT49 309 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 EHFQ9NZC4 300 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 TENM3Q9P273 2699 aa12.72□□□□□ -0.37
PDLIM7-201ENST00000355572 S1PR2O95136 353 aa12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 DCTN2Q13561 401 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 MSMO1Q15800 293 aa12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 OR51H1Q8NH63 302 aa12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 S100A16Q96FQ6 103 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 CCDC140Q96MF4 163 aa12.71□□□□□ -0.37
PDLIM7-201ENST00000355572 NHLRC4P0CG21 123 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 CBX5P45973 191 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 MECP2P51608 486 aaKnown RBP12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 TMEM69Q5SWH9 247 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 SPIN2AQ99865 258 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 SPIN2BQ9BPZ2 258 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 ZNF2Q9BSG1 426 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 IFT46Q9NQC8 304 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 SLC2A9Q9NRM0 540 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 BET1LQ9NYM9 111 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 COMMD3Q9UBI1 195 aa12.7□□□□□ -0.38
PDLIM7-201ENST00000355572 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 FAM223BA6NKX1 122 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 NPIPB5A8MRT5 1133 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 HPGDSO60760 199 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 TMEM127O75204 238 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 ACTL6BO94805 426 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 CTRB1P17538 263 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 ELK1P19419 428 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 OR2B8PP59922 312 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 ATP5G2Q06055 141 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 POU2AF1Q16633 256 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 C15orf32Q32M92 178 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 CTRB2Q6GPI1 263 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 DHRS11Q6UWP2 260 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 CROCCP3Q8IVE0 287 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 FAM223AQ8IWN6 122 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 GPX8Q8TED1 209 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 MOB3AQ96BX8 217 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 BCL7BQ9BQE9 202 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 ELOVL1Q9BW60 279 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 ZNF257Q9Y2Q1 563 aa12.69□□□□□ -0.38
PDLIM7-201ENST00000355572 IGLC7A0M8Q6 106 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 MFSD2BA6NFX1 497 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 UPK2O00526 184 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 RBFOX2O43251 390 aaKnown RBP eCLIP12.68□□□□□ -0.381e-6■■■■□ 21.4
PDLIM7-201ENST00000355572 RLN1P04808 185 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 CRYGCP07315 174 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 IGHV4-30-4P0DP06 118 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 HLA-GP17693 338 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 HLA-DMAP28067 261 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 PSMB6P28072 239 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 RPL8P62917 257 aaKnown RBP12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 CTF1Q16619 201 aa12.68□□□□□ -0.38
PDLIM7-201ENST00000355572 RPEL1Q2QD12 228 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms