RNA–Protein interactions for RNA: ENST00000345057.8

TRADD-201, Transcript of TNFRSF1A associated via death domain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRADD, Length 1,877 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-201ENST00000345057 OR2G3Q8NGZ4 309 aa20.53■□□□□ 0.88
TRADD-201ENST00000345057 HARBI1Q96MB7 349 aa20.53■□□□□ 0.88
TRADD-201ENST00000345057 OR4C12Q96R67 309 aa20.53■□□□□ 0.88
TRADD-201ENST00000345057 SH3BGRL3Q9H299 93 aa20.53■□□□□ 0.88
TRADD-201ENST00000345057 MALRD1Q5VYJ5 2156 aa20.53■□□□□ 0.88
TRADD-201ENST00000345057 KRBOX1C9JBD0 128 aa20.52■□□□□ 0.88
TRADD-201ENST00000345057 PRH1P02810 166 aa20.52■□□□□ 0.88
TRADD-201ENST00000345057 ENY2Q9NPA8 101 aa20.52■□□□□ 0.88
TRADD-201ENST00000345057 HEYLQ9NQ87 328 aaPredicted RBP20.52■□□□□ 0.88
TRADD-201ENST00000345057 TCF19Q9Y242 345 aa20.52■□□□□ 0.88
TRADD-201ENST00000345057 TRAV3A0A0B4J244 114 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 UPK2O00526 184 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 ARG1P05089 322 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 REG1BP48304 166 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 CAMLGP49069 296 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 OR8G2PQ6IF36 304 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 Q6ZRG5 221 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 KIR3DL3Q8N743 410 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 OR4A5Q8NH83 315 aa20.52■□□□□ 0.87
TRADD-201ENST00000345057 TEX46H3BTG2 121 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 NDUFS7O75251 213 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 HOXA1P49639 335 aaPredicted RBP20.51■□□□□ 0.87
TRADD-201ENST00000345057 ARL16Q0P5N6 197 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 C1orf122Q6ZSJ8 110 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 HAPLN4Q86UW8 402 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 NARFLQ9H6Q4 476 aa20.51■□□□□ 0.87
TRADD-201ENST00000345057 BUB1B-PAK6H3BSN5 160 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 TMEM182Q6ZP80 229 aaPredicted RBP20.5■□□□□ 0.87
TRADD-201ENST00000345057 SAA1P0DJI8 122 aaPredicted RBP20.5■□□□□ 0.87
TRADD-201ENST00000345057 VDAC2P45880 294 aaPredicted RBP20.5■□□□□ 0.87
TRADD-201ENST00000345057 LRRC75BQ2VPJ9 315 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 SPINK9Q5DT21 86 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 CCL19Q99731 98 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 PSMG3Q9BT73 122 aaPredicted RBP20.5■□□□□ 0.87
TRADD-201ENST00000345057 TMEM147Q9BVK8 224 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 HRH4Q9H3N8 390 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 PLA2G2EQ9NZK7 142 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 OR51B2Q9Y5P1 312 aa20.5■□□□□ 0.87
TRADD-201ENST00000345057 KBTBD11O94819 623 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 IGHV2-5P01817 119 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 ZP3P21754 424 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 USF1P22415 310 aaPredicted RBP20.49■□□□□ 0.87
TRADD-201ENST00000345057 PJVKQ0ZLH3 352 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 DPPA3Q6W0C5 159 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 OR5B3Q8NH48 314 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 IGFBPL1Q8WX77 278 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 DOPEY1Q5JWR5 2465 aa20.49■□□□□ 0.87
TRADD-201ENST00000345057 PMS2P5A8MQ11 134 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 ENSAO43768 121 aaKnown RBP20.48■□□□□ 0.87
TRADD-201ENST00000345057 IFNA10P01566 189 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 LGALS7P47929 136 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 PDLIM4P50479 330 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 RPS16P62249 146 aaKnown RBP20.48■□□□□ 0.87
TRADD-201ENST00000345057 RAB11AP62491 216 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 BTNL8Q6UX41 500 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 LYPD6BQ8NI32 183 aa20.48■□□□□ 0.87
TRADD-201ENST00000345057 MS4A7Q9GZW8 240 aaPredicted RBP20.48■□□□□ 0.87
TRADD-201ENST00000345057 SRRM4A7MD48 611 aaKnown RBP20.47■□□□□ 0.87
TRADD-201ENST00000345057 PRTN3P24158 256 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 COX7A1P24310 79 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 DIAPH2-AS1Q14236 149 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 AKR1C8PQ5T2L2 129 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 THNSL2Q86YJ6 484 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 COMMD1Q8N668 190 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 OR11H6Q8NGC7 330 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 WDR61Q9GZS3 305 aaKnown RBP20.47■□□□□ 0.87
TRADD-201ENST00000345057 UQCC1Q9NVA1 299 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 INSIG2Q9Y5U4 225 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 C15orf62A8K5M9 175 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 ARF6P62330 175 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 ZNF616Q08AN1 781 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 VMA21Q3ZAQ7 101 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 PNKDQ8N490 385 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 Q8N7P7 452 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 OR4P4Q8NGL7 312 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 RPEQ96AT9 228 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 GGACTQ9BVM4 153 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 LRBAP50851 2863 aa20.47■□□□□ 0.87
TRADD-201ENST00000345057 ATP5IP56385 69 aaPredicted RBP20.46■□□□□ 0.87
TRADD-201ENST00000345057 SERF2P84101 59 aa20.46■□□□□ 0.87
TRADD-201ENST00000345057 KPTNQ9Y664 436 aa20.46■□□□□ 0.87
TRADD-201ENST00000345057 CEACAM3P40198 252 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 PRCDQ00LT1 54 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 PLEKHA3Q9HB20 300 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 TIMM9Q9Y5J7 89 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 TSPAN15O95858 294 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 RUNX1Q01196 453 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 VWC2Q2TAL6 325 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 TMEM167AQ8TBQ9 72 aa20.45■□□□□ 0.86
TRADD-201ENST00000345057 TAF15Q92804 592 aaKnown RBP eCLIP20.45■□□□□ 0.86
TRADD-201ENST00000345057 IGHV1-3A0A0C4DH29 117 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 UBE2L5PA0A1B0GUS4 154 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 RNF224P0DH78 156 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 RPL8P62917 257 aaKnown RBP20.44■□□□□ 0.86
TRADD-201ENST00000345057 FAM213BQ8TBF2 198 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 BPESC1Q9GZL8 116 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 COMMD5Q9GZQ3 224 aa20.44■□□□□ 0.86
TRADD-201ENST00000345057 UNKLQ9H9P5 680 aaKnown RBP20.44■□□□□ 0.86
TRADD-201ENST00000345057 IGHV4-39P01824 125 aa20.43■□□□□ 0.86
TRADD-201ENST00000345057 HTR1DP28221 377 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms