RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 S1PR2O95136 353 aa21.08■□□□□ 0.97
SSU72-201ENST00000291386 IL6RP08887 468 aaPredicted RBP21.08■□□□□ 0.97
SSU72-201ENST00000291386 BAK1Q16611 211 aa21.08■□□□□ 0.97
SSU72-201ENST00000291386 C2orf68Q2NKX9 166 aa21.08■□□□□ 0.97
SSU72-201ENST00000291386 HIST2H2BDQ6DRA6 164 aa21.08■□□□□ 0.97
SSU72-201ENST00000291386 ZNF430Q9H8G1 570 aaPredicted RBP21.08■□□□□ 0.97
SSU72-201ENST00000291386 CNIH1O95406 144 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 IGLV1-40P01703 118 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 PI3P19957 117 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 LPAR6P43657 344 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 CCDC71LQ8N9Z2 235 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 TMEM68Q96MH6 324 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 FAM103A1Q9BTL3 118 aaKnown RBP21.07■□□□□ 0.96
SSU72-201ENST00000291386 AKIP1Q9NQ31 210 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 ZFP57Q9NU63 452 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 MCUBQ9NWR8 336 aa21.07■□□□□ 0.96
SSU72-201ENST00000291386 FGF2P09038 288 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 PSMB8P28062 276 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 MAS1LP35410 378 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 GNB1P62873 340 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 OR4A47Q6IF82 309 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 ABHD5Q8WTS1 349 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 SCGB3A2Q96PL1 93 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 RTBDNQ9BSG5 229 aaPredicted RBP21.06■□□□□ 0.96
SSU72-201ENST00000291386 C5orf66Q9H5L9 145 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 COPZ2Q9P299 210 aa21.06■□□□□ 0.96
SSU72-201ENST00000291386 H0Y980 276 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 TNXAQ16473 311 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 ECSCRQ19T08 205 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 TRIQKQ629K1 86 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 SSX9Q7RTT3 188 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 LFNGQ8NES3 379 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 R3HDM4Q96D70 268 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 C14orf166Q9Y224 244 aaKnown RBP21.05■□□□□ 0.96
SSU72-201ENST00000291386 TRRAPQ9Y4A5 3859 aa21.05■□□□□ 0.96
SSU72-201ENST00000291386 B3GALNT1O75752 331 aa21.04■□□□□ 0.96
SSU72-201ENST00000291386 CXorf66Q5JRM2 361 aaPredicted RBP21.04■□□□□ 0.96
SSU72-201ENST00000291386 UNQ5815/PRO19632Q6UWF5 114 aa21.04■□□□□ 0.96
SSU72-201ENST00000291386 GRPEL2Q8TAA5 225 aa21.04■□□□□ 0.96
SSU72-201ENST00000291386 SRSF12Q8WXF0 261 aaKnown RBP21.04■□□□□ 0.96
SSU72-201ENST00000291386 FOXA2Q9Y261 457 aaPredicted RBP21.04■□□□□ 0.96
SSU72-201ENST00000291386 MARCH11A6NNE9 402 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 ACTL6BO94805 426 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 RPA2P15927 270 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 RPL23AP62750 156 aaKnown RBP21.03■□□□□ 0.96
SSU72-201ENST00000291386 NSUN5P1Q3KNT7 163 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 ZNF57Q68EA5 555 aaPredicted RBP21.03■□□□□ 0.96
SSU72-201ENST00000291386 OR5M8Q8NGP6 311 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 MYOZ3Q8TDC0 251 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 TMEM140Q9NV12 185 aa21.03■□□□□ 0.96
SSU72-201ENST00000291386 C3orf85A0A1B0GTC6 90 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 A0A1W2PN81 502 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 UPK2O00526 184 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 SOX15O60248 233 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 CHRNA7P36544 502 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 INPP1P49441 399 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 ERVK-16P61578 105 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 RPL8P62917 257 aaKnown RBP21.02■□□□□ 0.96
SSU72-201ENST00000291386 DMBX1Q8NFW5 382 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 S100ZQ8WXG8 99 aa21.02■□□□□ 0.96
SSU72-201ENST00000291386 NAP1L6A6NFF2 107 aa21.01■□□□□ 0.95
SSU72-201ENST00000291386 RPLP1P05386 114 aaKnown RBP21.01■□□□□ 0.95
SSU72-201ENST00000291386 IL7P13232 177 aa21.01■□□□□ 0.95
SSU72-201ENST00000291386 SLC6A1P30531 599 aa21.01■□□□□ 0.95
SSU72-201ENST00000291386 ASPHD1Q5U4P2 390 aa21.01■□□□□ 0.95
SSU72-201ENST00000291386 TP53RKQ96S44 253 aa21.01■□□□□ 0.95
SSU72-201ENST00000291386 MSGN1A6NI15 193 aa21■□□□□ 0.95
SSU72-201ENST00000291386 TSPAN15O95858 294 aa21■□□□□ 0.95
SSU72-201ENST00000291386 IGKV1-39P01597 117 aa21■□□□□ 0.95
SSU72-201ENST00000291386 IGKV1D-39P04432 117 aa21■□□□□ 0.95
SSU72-201ENST00000291386 SERPINE2P07093 398 aa21■□□□□ 0.95
SSU72-201ENST00000291386 CDX1P47902 265 aaPredicted RBP21■□□□□ 0.95
SSU72-201ENST00000291386 OR4F17Q8NGA8 305 aa21■□□□□ 0.95
SSU72-201ENST00000291386 SEC22AQ96IW7 307 aa21■□□□□ 0.95
SSU72-201ENST00000291386 OR4F4Q96R69 305 aa21■□□□□ 0.95
SSU72-201ENST00000291386 SPIN2AQ99865 258 aa21■□□□□ 0.95
SSU72-201ENST00000291386 SPIN2BQ9BPZ2 258 aa21■□□□□ 0.95
SSU72-201ENST00000291386 SLC25A21Q9BQT8 299 aaPredicted RBP21■□□□□ 0.95
SSU72-201ENST00000291386 VSIG4Q9Y279 399 aa21■□□□□ 0.95
SSU72-201ENST00000291386 WNK1Q9H4A3 2382 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 H3BUA1 57 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 BRI3O95415 125 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 KRASP01116 189 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 HLA-GP17693 338 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 UCP1P25874 307 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 G6PCP35575 357 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 RAB9AP51151 201 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 KHDC1LQ5JSQ8 128 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 C7orf50Q9BRJ6 194 aaKnown RBP20.99■□□□□ 0.95
SSU72-201ENST00000291386 CCDC32Q9BV29 185 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 NAA60Q9H7X0 242 aa20.99■□□□□ 0.95
SSU72-201ENST00000291386 TRAV3A0A0B4J244 114 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 CRYM-AS1A6NIL9 109 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 KIAA0141Q14154 515 aaPredicted RBP20.98■□□□□ 0.95
SSU72-201ENST00000291386 C10orf55Q5SWW7 151 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 TMEM65Q6PI78 240 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 PHB2Q99623 299 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 KLK15Q9H2R5 256 aa20.98■□□□□ 0.95
SSU72-201ENST00000291386 A0A1W2PRX2 142 aa20.97■□□□□ 0.95
SSU72-201ENST00000291386 PF4V1P10720 104 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms