RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 HRASP01112 189 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 APOA2P02652 100 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 CD5P06127 495 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 IL6RP08887 468 aaPredicted RBP11.79□□□□□ -0.52
TRIM23-202ENST00000274327 COX7A1P24310 79 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 REG1BP48304 166 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 TAS2R30P59541 319 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 RELBQ01201 579 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 EWSR1Q01844 656 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRIM23-202ENST00000274327 HCP5Q6MZN7 132 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 SSX9Q7RTT3 188 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 TGIF2LXQ8IUE1 241 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 VKORC1L1Q8N0U8 176 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 PNKDQ8N490 385 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 OR11H6Q8NGC7 330 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 LYPD6BQ8NI32 183 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 SLC25A31Q9H0C2 315 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 RBKSQ9H477 322 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 TREM1Q9NP99 234 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 WSB1Q9Y6I7 421 aa11.79□□□□□ -0.52
TRIM23-202ENST00000274327 IGHV2-70DA0A0C4DH43 119 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 LY6LH3BQJ8 138 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 J3QKU1 62 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 MED6O75586 246 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 IGKV1-16P04430 117 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 UBE2KP61086 200 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 RPL23AP62750 156 aaKnown RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 PRB3Q04118 309 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 TMEM177Q53S58 311 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 CLEC9AQ6UXN8 241 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 PDPNQ86YL7 162 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 C15orf54Q8N8G6 183 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 NRGNQ92686 78 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 QTRT1Q9BXR0 403 aaKnown RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 SAV1Q9H4B6 383 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 POLR3KQ9Y2Y1 108 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 AMMECR1Q9Y4X0 333 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 KPTNQ9Y664 436 aa11.78□□□□□ -0.52
TRIM23-202ENST00000274327 TET2Q6N021 2002 aaPredicted RBP11.78□□□□□ -0.52
TRIM23-202ENST00000274327 TXNL1O43396 289 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 FBXO24O75426 580 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 IAPPP10997 89 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 COL8A1P27658 744 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 DVL1P1P54792 670 aaPredicted RBP11.77□□□□□ -0.52
TRIM23-202ENST00000274327 NHLH2Q02577 135 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 RNF212Q495C1 297 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 CLEC2AQ6UVW9 174 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 OSR1Q8TAX0 266 aaPredicted RBP11.77□□□□□ -0.52
TRIM23-202ENST00000274327 RBMXL1Q96E39 390 aaKnown RBP11.77□□□□□ -0.52
TRIM23-202ENST00000274327 RHOVQ96L33 236 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 SIRPDQ9H106 197 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 SIRT7Q9NRC8 400 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 SMCO4Q9NRQ5 59 aa11.77□□□□□ -0.52
TRIM23-202ENST00000274327 LRRK2Q5S007 2527 aa11.77□□□□□ -0.53
TRIM23-202ENST00000274327 TRAV3A0A0B4J244 114 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 SRRM4A7MD48 611 aaKnown RBP11.76□□□□□ -0.53
TRIM23-202ENST00000274327 ODF3BA8MYP8 253 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 RNASEK-C17orf49H0YIS7 233 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 RAB5CP51148 216 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 LCN2P80188 198 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 BAXQ07812 192 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 PDLIM3Q53GG5 364 aaPredicted RBP11.76□□□□□ -0.53
TRIM23-202ENST00000274327 RPL7L1Q6DKI1 246 aaKnown RBP11.76□□□□□ -0.53
TRIM23-202ENST00000274327 OR4A47Q6IF82 309 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 BTNL8Q6UX41 500 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 UBAC2Q8NBM4 344 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 OR52E5Q8NH55 327 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 OR4A16Q8NH70 328 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 TUBA4BQ9H853 241 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 WFDC1Q9HC57 220 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 PSENENQ9NZ42 101 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 CHD6Q8TD26 2715 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 IGHV4-61A0A0C4DH41 118 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 FOXH1O75593 365 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 MC5RP33032 325 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 OR2B8PP59922 312 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 B2MP61769 119 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 ZNF787Q6DD87 383 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 ZNF429Q86V71 674 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 PERPQ96FX8 193 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 ARV1Q9H2C2 271 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 WASHC3Q9Y3C0 194 aa11.76□□□□□ -0.53
TRIM23-202ENST00000274327 C15orf61A6NNL5 157 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 FAM157AC9JC47 383 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 DSCR9P59020 149 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 RAB5BP61020 215 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 VMO1Q7Z5L0 202 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 LHX4Q969G2 390 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 FLYWCH2Q96CP2 140 aaKnown RBP11.75□□□□□ -0.53
TRIM23-202ENST00000274327 SMDT1Q9H4I9 107 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 BET1LQ9NYM9 111 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 CACFD1Q9UGQ2 172 aa11.75□□□□□ -0.53
TRIM23-202ENST00000274327 IGHV4-30-2A0A087WSY4 118 aa11.74□□□□□ -0.53
TRIM23-202ENST00000274327 IGHV1-3A0A0C4DH29 117 aa11.74□□□□□ -0.53
TRIM23-202ENST00000274327 H3BP45 60 aa11.74□□□□□ -0.53
TRIM23-202ENST00000274327 UPK2O00526 184 aa11.74□□□□□ -0.53
TRIM23-202ENST00000274327 RBMXL2O75526 392 aaKnown RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 659.6 ms