RNA–Protein interactions for RNA: ENST00000266735.9

SNRPF-201, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPF, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-201ENST00000266735 TRIM16LQ309B1 348 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 SP6Q3SY56 376 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 MZT2BQ6NZ67 158 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 CENPVQ7Z7K6 275 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-201ENST00000266735 MMD2Q8IY49 270 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 CENPSQ8N2Z9 138 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 SPATA3Q8NHX4 192 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 ARPC1AQ92747 370 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 GALNT14Q96FL9 552 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 NOL4LQ96MY1 436 aaPredicted RBP12.99□□□□□ -0.33
SNRPF-201ENST00000266735 PARP11Q9NR21 331 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 TMEM140Q9NV12 185 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 TBC1D24Q9ULP9 559 aa12.99□□□□□ -0.33
SNRPF-201ENST00000266735 ATG12O94817 140 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 CNIH1O95406 144 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 ANXA3P12429 323 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 VDAC1P21796 283 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 G6PCP35575 357 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 GNB1P62873 340 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 SLC35B1P78383 322 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 MRGPRG-AS1Q2M3A8 158 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 TMEM128Q5BJH2 165 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 WIPF2Q8TF74 440 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-201ENST00000266735 ABHD5Q8WTS1 349 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 TMEM222Q9H0R3 208 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 ZNF430Q9H8G1 570 aaPredicted RBP12.98□□□□□ -0.33
SNRPF-201ENST00000266735 LINC00527Q9UJ94 153 aa12.98□□□□□ -0.33
SNRPF-201ENST00000266735 PSMB11A5LHX3 300 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 ARPC1BO15143 372 aaKnown RBP12.97□□□□□ -0.33
SNRPF-201ENST00000266735 IGKV1-39P01597 117 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 IGKV1D-39P04432 117 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 IL6RP08887 468 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-201ENST00000266735 FGF2P09038 288 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 SLC6A1P30531 599 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 MAS1LP35410 378 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 CRIP2P52943 208 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-201ENST00000266735 SSBP2P81877 361 aaPredicted RBP12.97□□□□□ -0.33
SNRPF-201ENST00000266735 IFITM3Q01628 133 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 TNXAQ16473 311 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 SGMS2Q8NHU3 365 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 GLYATL2Q8WU03 294 aa12.97□□□□□ -0.33
SNRPF-201ENST00000266735 UPK2O00526 184 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 CDS2O95674 445 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 UBE2MP61081 183 aaKnown RBP12.96□□□□□ -0.33
SNRPF-201ENST00000266735 RPL8P62917 257 aaKnown RBP12.96□□□□□ -0.33
SNRPF-201ENST00000266735 TMEM267Q0VDI3 215 aaPredicted RBP12.96□□□□□ -0.33
SNRPF-201ENST00000266735 SHISA2Q6UWI4 295 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 SLC25A42Q86VD7 318 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 GRPEL2Q8TAA5 225 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 SEC22AQ96IW7 307 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 TSC22D3Q99576 134 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 FBXO7Q9Y3I1 522 aa12.96□□□□□ -0.33
SNRPF-201ENST00000266735 TRAV41A0A0B4J266 112 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 FAM240BA0A1B0GVZ2 78 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 TCRBP04435 133 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 EGR2P11161 476 aaPredicted RBP12.95□□□□□ -0.34
SNRPF-201ENST00000266735 HLA-GP17693 338 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 AKR1C2P52895 323 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 DEFA1P59665 94 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 DEFA3P59666 94 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 KRTAP10-3P60369 221 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 SUPT4H1P63272 117 aaKnown RBP12.95□□□□□ -0.34
SNRPF-201ENST00000266735 SRPXP78539 464 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 ECSCRQ19T08 205 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 ZNF695Q8IW36 515 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 COMMD1Q8N668 190 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 OR5AU1Q8NGC0 362 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 OR4X2Q8NGF9 303 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 SRSF12Q8WXF0 261 aaKnown RBP12.95□□□□□ -0.34
SNRPF-201ENST00000266735 RBPMSQ93062 196 aaKnown RBP12.95□□□□□ -0.34
SNRPF-201ENST00000266735 IL22RA2Q969J5 263 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM56Q96MV1 263 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 CITED1Q99966 193 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 FAM103A1Q9BTL3 118 aaKnown RBP12.95□□□□□ -0.34
SNRPF-201ENST00000266735 C20orf85Q9H1P6 137 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 FLVCR2Q9UPI3 526 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 NUBP2Q9Y5Y2 271 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 WSB1Q9Y6I7 421 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM56-RWDD3S4R434 201 aa12.95□□□□□ -0.34
SNRPF-201ENST00000266735 PIGBOS1A0A0B4J2F0 54 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 SNAPC5O75971 98 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 VAMP1P23763 118 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 CFHR3Q02985 330 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM187Q14656 261 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 AKIRIN2Q53H80 203 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 H2BFWTQ7Z2G1 175 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 ZNF329Q86UD4 541 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM68Q96MH6 324 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 PHB2Q99623 299 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 SPIN2AQ99865 258 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 SPIN2BQ9BPZ2 258 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 TRAV3A0A0B4J244 114 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 G3V318 75 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 FBXO24O75426 580 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 SFT2D2O95562 160 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 PPIFP30405 207 aaKnown RBP12.94□□□□□ -0.34
SNRPF-201ENST00000266735 PPP1R1AQ13522 171 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 C10orf55Q5SWW7 151 aa12.94□□□□□ -0.34
SNRPF-201ENST00000266735 TMEM268Q5VZI3 342 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms