RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 ARPC1BO15143 372 aaKnown RBP11.28□□□□□ -0.6
SSBP1-201ENST00000265304 PEX14O75381 377 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 ATG12O94817 140 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 KBTBD11O94819 623 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 DUS4LO95620 317 aaKnown RBP11.28□□□□□ -0.6
SSBP1-201ENST00000265304 CRYBA1P05813 215 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 H2AFB2P0C5Z0 115 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 OR4E1P0C645 316 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 MAS1LP35410 378 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 SRPXP78539 464 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 DHRS2Q13268 280 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 PPP1R1AQ13522 171 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 SP6Q3SY56 376 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 C19orf54Q5BKX5 351 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 OR4A47Q6IF82 309 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 TMED4Q7Z7H5 227 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 SELENOHQ8IZQ5 122 aaKnown RBP11.28□□□□□ -0.6
SSBP1-201ENST00000265304 LINC01006Q8NI28 216 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 RBPMSQ93062 196 aaKnown RBP11.28□□□□□ -0.6
SSBP1-201ENST00000265304 LSM10Q969L4 123 aaKnown RBP11.28□□□□□ -0.6
SSBP1-201ENST00000265304 WNT10AQ9GZT5 417 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 SHPKQ9UHJ6 478 aa11.28□□□□□ -0.6
SSBP1-201ENST00000265304 DUXBA0A1W2PPF3 345 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 UPK2O00526 184 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 KCNAB3O43448 404 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 IGKV1-5P01602 117 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 EGR2P11161 476 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-201ENST00000265304 ANXA3P12429 323 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 ANXA7P20073 488 aaKnown RBP11.27□□□□□ -0.61
SSBP1-201ENST00000265304 CX3CL1P78423 397 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 LYG2Q86SG7 212 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 FAM219AQ8IW50 185 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 MMD2Q8IY49 270 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-201ENST00000265304 OR4F5Q8NH21 305 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 ENKURQ8TC29 256 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 ZNF430Q9H8G1 570 aaPredicted RBP11.27□□□□□ -0.61
SSBP1-201ENST00000265304 TPSG1Q9NRR2 321 aa11.27□□□□□ -0.61
SSBP1-201ENST00000265304 DBX1A6NMT0 343 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 CREBL2O60519 120 aaPredicted RBP11.26□□□□□ -0.61
SSBP1-201ENST00000265304 KRASP01116 189 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 VDAC1P21796 283 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
SSBP1-201ENST00000265304 PJVKQ0ZLH3 352 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 FOXL1Q12952 345 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 ANKRD55Q3KP44 614 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 NMSQ5H8A3 153 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 PLET1Q6UQ28 207 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 VKORC1L1Q8N0U8 176 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 LGI3Q8N145 548 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 MITD1Q8WV92 249 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 HSPB9Q9BQS6 159 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 OR51J1Q9H342 316 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 TMEM140Q9NV12 185 aa11.26□□□□□ -0.61
SSBP1-201ENST00000265304 CLPSL1A2RUU4 121 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 LINC01548A6NM66 108 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 PRAF2O60831 178 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 BRI3O95415 125 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 SLC25A6P12236 298 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 PROK1P58294 105 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 RPL8P62917 257 aaKnown RBP11.25□□□□□ -0.61
SSBP1-201ENST00000265304 OXA1LQ15070 435 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 KLK9Q2XQG4 91 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 ZNF429Q86V71 674 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 FOXRED2Q8IWF2 684 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 OR2T6Q8NHC8 308 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 TMEM158Q8WZ71 300 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 TMEM14BQ9NUH8 114 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 KLK9Q9UKQ9 250 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 ZNF257Q9Y2Q1 563 aa11.25□□□□□ -0.61
SSBP1-201ENST00000265304 TRAV6A0A075B6T7 132 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 TRAV3A0A0B4J244 114 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 A0A0B4J293 547 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 SNRPGP15A8MWD9 76 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 INMT-MINDY4F8WBC2 141 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 AP4M1O00189 453 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 G6PCP35575 357 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 ERVK-16P61578 105 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 NDPQ00604 133 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 CFHR3Q02985 330 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 PDLIM3Q53GG5 364 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-201ENST00000265304 AKIRIN2Q53H80 203 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 SLC35E3Q7Z769 313 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 SGMS2Q8NHU3 365 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 ZNF431Q8TF32 576 aaPredicted RBP11.24□□□□□ -0.61
SSBP1-201ENST00000265304 TMEM68Q96MH6 324 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 SRSF8Q9BRL6 282 aaKnown RBP11.24□□□□□ -0.61
SSBP1-201ENST00000265304 BEX1Q9HBH7 125 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 FKBP11Q9NYL4 201 aa11.24□□□□□ -0.61
SSBP1-201ENST00000265304 A0A0G2JRQ6 117 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 C7orf66A4D0T2 115 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 SH2D7A6NKC9 451 aaPredicted RBP11.23□□□□□ -0.61
SSBP1-201ENST00000265304 C15orf61A6NNL5 157 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 CA2P00918 260 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 HLA-AP01891 365 aaKnown RBP11.23□□□□□ -0.61
SSBP1-201ENST00000265304 OR9G9P0C7N8 305 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 SPNP16150 400 aa11.23□□□□□ -0.61
SSBP1-201ENST00000265304 HLA-GP17693 338 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms