RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 BEX1Q9HBH7 125 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 SERTAD4Q9NUC0 356 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 MMP24Q9Y5R2 645 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 NUBP2Q9Y5Y2 271 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM56-RWDD3S4R434 201 aa13.14□□□□□ -0.31
CHCHD3-201ENST00000262570 KCNAB3O43448 404 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 SFT2D2O95562 160 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 ANXA3P12429 323 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 MDKP21741 143 aaPredicted RBP13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 VAMP1P23763 118 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 MECP2P51608 486 aaKnown RBP13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 SSBP2P81877 361 aaPredicted RBP13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 DCTN2Q13561 401 aaKnown RBP13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 PRSS8Q16651 343 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM95Q3KNT9 176 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 OR4A5Q8NH83 315 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 ZNF430Q9H8G1 570 aaPredicted RBP13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM140Q9NV12 185 aa13.13□□□□□ -0.31
CHCHD3-201ENST00000262570 PLXNB1O43157 2135 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 A0A1B0GUS0 222 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 CLPSL1A2RUU4 121 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 H2AFB2P0C5Z0 115 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 OR4E1P0C645 316 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 VDAC2P45880 294 aaPredicted RBP13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 NDPQ00604 133 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 ARSJQ5FYB0 599 aaPredicted RBP13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 MMD2Q8IY49 270 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 SELENOHQ8IZQ5 122 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 RBPMSQ93062 196 aaKnown RBP13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 OR51J1Q9H342 316 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 TNCP24821 2201 aa13.12□□□□□ -0.31
CHCHD3-201ENST00000262570 TRAV3A0A0B4J244 114 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 C9orf170A2RU37 121 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 UPK2O00526 184 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 CREBL2O60519 120 aaPredicted RBP13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 ATG12O94817 140 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 IGKV1-5P01602 117 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 IGF1P05019 195 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 COMPP49747 757 aaPredicted RBP13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 ZNF695Q8IW36 515 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 IL22RA2Q969J5 263 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 PRR13Q9NZ81 148 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 RNF114Q9Y508 228 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 AP4M1O00189 453 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 HLA-AP01891 365 aaKnown RBP13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 FGF2P09038 288 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 P0C879 139 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 RPL8P62917 257 aaKnown RBP13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 SRPXP78539 464 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 DHRS2Q13268 280 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 FXYD3Q14802 87 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 KRTAP21-3Q3LHN1 58 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 C4orf46Q504U0 113 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 TMEM268Q5VZI3 342 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 PLET1Q6UQ28 207 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 H2BFWTQ7Z2G1 175 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 LYG2Q86SG7 212 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 FOXRED2Q8IWF2 684 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 WNT10AQ9GZT5 417 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 ZNF580Q9UK33 172 aa13.11□□□□□ -0.31
CHCHD3-201ENST00000262570 ATP6V0E1O15342 81 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 PTTG1O95997 202 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 OR9G9P0C7N8 305 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 EGR2P11161 476 aaPredicted RBP13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 AKR1C2P52895 323 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 RAB25P57735 213 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 PROK1P58294 105 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 GNB1P62873 340 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 TNXAQ16473 311 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 ANKRD55Q3KP44 614 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 AWAT1Q58HT5 328 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 LGI3Q8N145 548 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 LRTM2Q8N967 370 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 CASTOR1Q8WTX7 329 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 NOL4LQ96MY1 436 aaPredicted RBP13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 MARVELD1Q9BSK0 173 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 LINC00527Q9UJ94 153 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 FBXO7Q9Y3I1 522 aa13.1□□□□□ -0.31
CHCHD3-201ENST00000262570 ACTL6BO94805 426 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 CNIH1O95406 144 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 MAS1LP35410 378 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 STPG2Q8N412 459 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 SLC35G3Q8N808 338 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 ARPC1AQ92747 370 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 RRNAD1Q96FB5 475 aaKnown RBP13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 MDFIQ99750 246 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 FAM103A1Q9BTL3 118 aaKnown RBP13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 PARP11Q9NR21 331 aa13.09□□□□□ -0.31
CHCHD3-201ENST00000262570 A0A0B4J2A0 478 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 PIGBOS1A0A0B4J2F0 54 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 A0A0G2JRQ6 117 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 DUS4LO95620 317 aaKnown RBP13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 HLA-GP17693 338 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 CRIP2P52943 208 aaPredicted RBP13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 LYZL2Q7Z4W2 148 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 SGMS2Q8NHU3 365 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 CHPT1Q8WUD6 406 aa13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 SRSF12Q8WXF0 261 aaKnown RBP13.08□□□□□ -0.32
CHCHD3-201ENST00000262570 LSM10Q969L4 123 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms