RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 RPS16P62249 146 aaKnown RBP13.29□□□□□ -0.28
UBE3D-201ENST00000237186 RAB1CQ92928 201 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 LEAP2Q969E1 77 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 RAB24Q969Q5 203 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 RHOVQ96L33 236 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 SLC25A22Q9H936 323 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 TMEM14BQ9NUH8 114 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 METTL1Q9UBP6 276 aaKnown RBP13.29□□□□□ -0.28
UBE3D-201ENST00000237186 ZNF98A6NK75 572 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 PSMB3P49720 205 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 HSPE1P61604 102 aaKnown RBP13.29□□□□□ -0.28
UBE3D-201ENST00000237186 MEF2CQ06413 473 aaPredicted RBP13.29□□□□□ -0.28
UBE3D-201ENST00000237186 BSPH1Q075Z2 132 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 OR4A47Q6IF82 309 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 WFDC8Q8IUA0 241 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 TMEM170AQ8WVE7 144 aa13.29□□□□□ -0.28
UBE3D-201ENST00000237186 A0A1W2PPE3 182 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 ATXN7O15265 892 aaPredicted RBP13.28□□□□□ -0.28
UBE3D-201ENST00000237186 TREML4Q6UXN2 200 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 TGIF2LYQ8IUE0 185 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 LYG1Q8N1E2 194 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 Q8WTZ3 238 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 TMPRSS5Q9H3S3 457 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 DCAF16Q9NXF7 216 aa13.28□□□□□ -0.28
UBE3D-201ENST00000237186 TRAV38-1A0A0B4J264 116 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 RRHO14718 337 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 MMP23AO75900 390 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 HRASP01112 189 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 OPRK1P41145 380 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 ERVFRD-1P60508 538 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 CCL8P80075 99 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 HNF4GQ14541 408 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 ZCCHC14Q8WYQ9 949 aaKnown RBP13.27□□□□□ -0.28
UBE3D-201ENST00000237186 CTDSP1Q9GZU7 261 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 NAT8Q9UHE5 227 aa13.27□□□□□ -0.28
UBE3D-201ENST00000237186 DMXL2Q8TDJ6 3036 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 NKX6-3A6NJ46 265 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 EIF3GO75821 320 aaKnown RBP eCLIP13.27□□□□□ -0.29
UBE3D-201ENST00000237186 CT45A6P0DMU7 189 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 CT45A5P0DMU8 189 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 CT45A7P0DMV0 189 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 ABHD12Q8N2K0 398 aa13.27□□□□□ -0.29
UBE3D-201ENST00000237186 PLCE1Q9P212 2302 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 RP1L1Q8IWN7 2480 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-201ENST00000237186 SMCO3A2RU48 225 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 VSTM5A8MXK1 200 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 CLDN34H7C241 214 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 TNFRSF13BO14836 293 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-201ENST00000237186 TMPRSS2O15393 492 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 KBTBD11O94819 623 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 CDC34P49427 236 aaPredicted RBP13.26□□□□□ -0.29
UBE3D-201ENST00000237186 C1orf87Q8N0U7 546 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 SNRNP40Q96DI7 357 aaKnown RBP13.26□□□□□ -0.29
UBE3D-201ENST00000237186 LSM4Q9Y4Z0 139 aaKnown RBP13.26□□□□□ -0.29
UBE3D-201ENST00000237186 DSCAMO60469 2012 aa13.26□□□□□ -0.29
UBE3D-201ENST00000237186 HMGB3O15347 200 aaKnown RBP13.25□□□□□ -0.29
UBE3D-201ENST00000237186 CXCL1P09341 107 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PLA2G5P39877 138 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 ZNF343Q6P1L6 599 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 SMIM7Q9BQ49 75 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 GAL3ST2Q9H3Q3 398 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 SLC25A10Q9UBX3 287 aaPredicted RBP13.25□□□□□ -0.29
UBE3D-201ENST00000237186 ZNF257Q9Y2Q1 563 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 DIDO1Q9BTC0 2240 aaKnown RBP13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PPIAL4EA0A075B759 164 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 FNDC10F2Z333 226 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PPIAL4DF5H284 164 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 TMEM178BH3BS89 294 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 AP4M1O00189 453 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 S100A8P05109 93 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PPIAL4FP0DN26 164 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 RPS10P46783 165 aaKnown RBP13.25□□□□□ -0.29
UBE3D-201ENST00000237186 MEOX2P50222 304 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 ZNF833PQ6ZTB9 187 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 MS4A5Q9H3V2 200 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 NGBQ9NPG2 151 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PRNDQ9UKY0 176 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 PPIAL4AQ9Y536 164 aa13.25□□□□□ -0.29
UBE3D-201ENST00000237186 YIF1AO95070 293 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 NDUFB7P17568 137 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 ATP5IP56385 69 aaPredicted RBP13.24□□□□□ -0.29
UBE3D-201ENST00000237186 OR13D1Q8NGV5 346 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 C1orf159Q96HA4 380 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 C12orf57Q99622 126 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 MGST2Q99735 147 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 SAP30LQ9HAJ7 183 aa13.24□□□□□ -0.29
UBE3D-201ENST00000237186 UPK2O00526 184 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 DLL1O00548 723 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 OPN1MWP04001 364 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 OPN1MW2P0DN77 364 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 OPN1MW3P0DN78 364 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 NPY1RP25929 384 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 GNG10P50151 68 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 FABP9Q0Z7S8 132 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 RTL8BQ17RB0 113 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 SLC24A4Q8NFF2 622 aa13.23□□□□□ -0.29
UBE3D-201ENST00000237186 GGTLC1Q9BX51 225 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms