RNA–Protein interactions for RNA: ENSMUST00000109477.1

Ccdc88a-202, Transcript of Girdin, mousemouse

TSL 2 BASIC

Gene Ccdc88a, Length 1,716 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-202ENSMUST00000109477 Prdx2Q61171 198 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Psg17Q62056 475 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr259Q7TS20 312 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Vmn1r178Q8R2B6 304 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1350Q8VF34 308 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tmem37Q9JJV3 211 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Zbtb32Q9JKD9 465 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mbd2Q9Z2E1 414 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 OtoglF7A4A7 2325 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm45808A0A1B0GSH8 263 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm15217A2CG07 155 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Zcchc24B2RVL6 241 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Prdm14E9Q3T6 561 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 SdcbpO08992 299 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Igsf11P0C673 428 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ly6c1P0CW02 131 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 LoxP28301 411 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Sec61a1P61620 476 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Kcnj3P63250 501 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Snai2P97469 269 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tctn2Q2MV57 700 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ctxn2Q3URE8 81 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 DbpQ60925 325 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr924Q7TRB8 308 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr222Q7TS30 318 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Q80X32 188 aaKnown RBP17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Katnal1Q8K0T4 488 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Wdr77Q99J09 342 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Bbc3Q99ML1 193 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr926Q9EQ98 308 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Trem1Q9JKE2 230 aa17.75■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr613E9PYB4 317 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Defa14P50712 85 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm21943Q5FWD5 227 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Vamp1Q62442 118 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1383Q7TQT2 311 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1283Q7TQY4 305 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr358Q7TRY5 330 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Sdhaf2Q8C6I2 164 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tmem230Q8CIB6 120 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tmem221Q8K071 230 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Vrk3Q8K3G5 453 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Acaa1bQ8VCH0 424 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Prodh2Q8VCZ9 456 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1420Q8VF55 309 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1446Q8VFX4 308 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mtfp1Q9CRB8 166 aa17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mbnl1Q9JKP5 341 aaKnown RBP17.74■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 1700025C18RikA2A580 89 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Znf385cA2A5E6 429 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm5799E9Q2M1 201 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mas1P30554 324 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Taar8bQ5QD06 344 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Cmc2Q8K199 79 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1184Q8VG86 311 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Bcl7bQ921K9 202 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Slc24a3Q99PD7 645 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tomm40lQ9CZR3 308 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Lypd8Q9D7S0 255 aa17.73■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm11565A2A4M7 156 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ear14F6YUX7 155 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Rnase2O35291 155 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gabra2P26048 451 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Rpl29P47915 160 aaKnown RBP17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Mdga2P60755 949 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Psg26Q4KL65 475 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Cisd1Q91WS0 108 aaKnown RBP17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Irak1bp1Q9ESJ7 259 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 SncgQ9Z0F7 123 aaKnown RBP17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm3550W4VSN7 160 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm3327F7C9A1 213 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm21721J3QMK7 227 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Vmn1r57K7N731 310 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr92L7N475 312 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ifna7P06799 190 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 RelP15307 587 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 P18525 117 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 AesP63002 197 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gpr160Q3U3F9 336 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Fam222bQ6P539 562 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1212Q7TR08 311 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1000Q7TR99 314 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 C1qtnf4Q8R066 326 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1238Q8VG59 315 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Lamp5Q9D387 280 aa17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Dtd1Q9DD18 209 aaKnown RBP17.72■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 TrrapQ80YV3 2565 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm9972E9Q053 102 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Phb2O35129 299 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 MosP00536 390 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Col8a2P25318 699 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Gm10840Q3V2K9 103 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Klf2Q60843 354 aaKnown RBP17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Ceacam14Q78Y72 263 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1219Q7TR04 311 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Sec22aQ8BH47 307 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Cdkl3Q8BLF2 595 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Vmn1r73Q8R293 303 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Tmem267Q8VDR5 215 aa17.71■□□□□ 0.43
Ccdc88a-202ENSMUST00000109477 Olfr1466Q8VFW4 310 aa17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 28.1 ms