RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 DeddQ9Z1L3 318 aa10.85□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Vps13cQ8BX70 3748 aa10.85□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Zfp407G3UVV3 2246 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Ighv6-5A0A0A6YWS9 119 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Olfr1496B9EHG2 317 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm4175D3YTW8 314 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm3676D3Z236 184 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Olfr427E9Q7E7 315 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Ercc1P07903 298 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Csf3P09920 208 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Mpc1P63030 109 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Fam160a2Q3U2I3 975 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Wdyhv1Q80WB5 209 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Cbln2Q8BGU2 224 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Rpp14Q9CQH8 122 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Syt7Q9R0N7 403 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Klk4Q9Z0M1 255 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm19410A0A140LJC7 2098 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 FryE9Q8I9 3020 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Prune2Q52KR3 3084 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm20911A0A087WSS0 222 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm45783A0A1B0GT48 74 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm14692A2BH01 229 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm20708H3BKF4 155 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Tesk1O70146 627 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 B4galt1P15535 399 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Dnase1P49183 284 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 SgcaP82350 387 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Mesp1P97309 243 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Fam57aQ5ND56 257 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 PiglQ5SX19 252 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Cisd2Q9CQB5 135 aaKnown RBP10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Nup37Q9CWU9 326 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Pip4p2Q9CZX7 257 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Vmn1r41Q9EQ44 310 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 SnapinQ9Z266 136 aa10.84□□□□□ -0.67
Rnf4-201ENSMUST00000030992 Gm28102A0A087WQL3 222 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21863J3KMP8 111 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21788J3QNH3 180 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 H2-M10.1O19443 331 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 GzmbP04187 247 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 PrkacaP05132 351 aaKnown RBP10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 P10404 641 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Prrc1Q3UPH1 443 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Jagn1Q5XKN4 183 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Cyb561Q60720 250 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 NarflQ7TMW6 476 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 PhyhiplQ8BGT8 375 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Plcxd1Q8CHS4 345 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Rbpms2Q8VC52 206 aaKnown RBP10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gins1Q9CZ15 196 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Q8BTG6 205 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Lyrm2Q8R033 88 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 SlirpQ9D8T7 112 aaKnown RBP10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 OdamA1E960 273 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Ca11O70354 328 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Wipf3P0C7L0 485 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Irf2P23906 349 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Rims4P60191 269 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gng3P63216 75 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Htr2bQ02152 479 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Ctxn2Q3URE8 81 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21943Q5FWD5 227 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Slc46a1Q6PEM8 459 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Olfr180Q7TS48 317 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Commd1Q8K4M5 188 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Phf19Q9CXG9 578 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Ppp1r27Q9D119 154 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Aurkaip1Q9DCJ7 200 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Fzr1Q9R1K5 493 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 TpbgQ9Z0L0 426 aa10.83□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21117A0A087WPJ9 222 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm20820A0A087WPP3 222 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm20937A0A087WQA3 222 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21258A0A087WQC7 222 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm28870A0A0A6YW38 222 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gsc2P56916 198 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 F13bQ07968 669 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 TskuQ8CBR6 354 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Znf672Q99LH4 468 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Olfr632Q9EPN9 317 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Cldn15Q9Z0S5 227 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 1700015F17RikD3YUK8 150 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Fpr2O88536 351 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 GzmaP11032 260 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Defa-rs2P17534 91 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Cks2P56390 79 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gal3st2cQ3ULK5 396 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Olfr1002Q8VFK2 318 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Slc29a3Q99P65 475 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Sapcd1Q9CY86 146 aa10.82□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm21095A0A087WR14 222 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm20824A0A087WS97 222 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm29866A0A0A6YX04 222 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 RnlsA7RDN6 342 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 MpgQ04841 333 aaKnown RBP10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Gm5127Q3UQH6 212 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Rasl2-9Q61820 216 aa10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 RalyQ64012 312 aaKnown RBP10.81□□□□□ -0.68
Rnf4-201ENSMUST00000030992 Rtn4rl2Q7M6Z0 420 aa10.81□□□□□ -0.68
Retrieved 100 of 22,080 RNA–protein pairs in 148.3 ms