RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 NagkQ9QZ08 343 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 EdarQ9R187 448 aa14.11□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm7233E9PZI8 198 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm9732F6QVC4 198 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Colca2F8VPY8 239 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm8104K7N744 198 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 UcnP81615 122 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Prrc1Q3UPH1 443 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Tle1Q62440 770 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Lefty1Q64280 368 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr305Q7TS02 319 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Plcxd3Q8BLJ3 321 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Gkn3Q9D0T7 191 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Samt4Q9D4X6 233 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Ndufb8Q9D6J5 186 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 S1pr3Q9Z0U9 378 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Cfap46E9Q2C0 2641 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr204E9Q8M0 305 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 G530012D18RikJ3QK25 139 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 A630023A22RikJ3QP60 199 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 P06335 190 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 B3gat2P59270 324 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Vdac2Q60930 295 aaKnown RBP14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Ceacam9Q78T27 234 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Zfp874bQ7M6X2 447 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Smap2Q7TN29 428 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 BC049730Q810N3 246 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Rab39bQ8BHC1 213 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 AtcayQ8BHE3 372 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Zmat5Q9CQR5 170 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Mansc1Q9CR33 414 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Fzr1Q9R1K5 493 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 TectaO08523 2155 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 IfnabL7MTU6 190 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Fut1O09160 376 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 IfngP01580 155 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 P01657 111 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Npy4rQ61041 375 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Snrnp70Q62376 448 aaKnown RBP14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr1509Q7TQQ0 308 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Mfsd9Q8C0T7 466 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Gpr84Q8CIM5 396 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr827Q8VEV5 322 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Borcs8Q9D6Y4 120 aa14.1□□□□□ -0.15
Shh-201ENSMUST00000002708 Celsr1O35161 3034 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Hbb-bh0P04443 147 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Saa1P05366 122 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Ceacam10Q61400 265 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 RalyQ64012 312 aaKnown RBP14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 MrgprfQ8VCJ6 343 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr1392Q8VFA6 311 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Rpusd4Q9CWX4 377 aaKnown RBP14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Tet1Q3URK3 2007 aaKnown RBP14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr250E9PV37 331 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Gm17669F6QL70 154 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 PomcP01193 235 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Cox5aP12787 146 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Upk3bQ80YF6 275 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 H2-M10.3Q85ZW6 330 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Vmn1r4Q8R2D3 297 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Thoc3Q8VE80 351 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Olfr710Q9EP55 310 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Mmp17Q9R0S3 578 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Psmb3Q9R1P1 205 aa14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Eif2s3xQ9Z0N1 472 aaKnown RBP14.09□□□□□ -0.15
Shh-201ENSMUST00000002708 Plxnb1Q8CJH3 2119 aa14.08□□□□□ -0.15
Shh-201ENSMUST00000002708 Zfp407G3UVV3 2246 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 GzmbP04187 247 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Nkx2-1P50220 372 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Dhrs2Q149L0 282 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Slc25a26Q5U680 274 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1137Q7TR40 310 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 PhyhiplQ8BGT8 375 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 4933407L21RikQ9D476 131 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Ypel1Q9ESC7 118 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Arpc1bQ9WV32 372 aaKnown RBP14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Cldn14Q9Z0S3 239 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1097A2AVA9 315 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Enpp7D3Z6V6 446 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Mas1P30554 324 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Hist1h1bP43276 223 aaKnown RBP14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 TspoP50637 169 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 FusP56959 518 aaKnown RBP14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Cln6Q3U466 308 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Oas1bQ60856 376 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Ypel4Q65Z93 127 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Slc6a8Q8VBW1 640 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 9130008F23RikQ9D2Z6 181 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 DeddQ9Z1L3 318 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 StrapQ9Z1Z2 350 aaKnown RBP14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Atoh7Q9Z2E5 149 aa14.08□□□□□ -0.16
Shh-201ENSMUST00000002708 Trav12-1A0N8R1 115 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Ankrd65F6YK91 380 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr895L7N210 316 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Chek1O35280 476 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Il10P18893 178 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 NmsQ5H8A1 153 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 Oxgr1Q6IYF8 337 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 PnlipQ6P8U6 465 aa14.07□□□□□ -0.16
Shh-201ENSMUST00000002708 C030005K15RikQ8BQN9 115 aa14.07□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms