RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 Tceal8Q9CZY2 117 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Cyc1Q9D0M3 325 aaKnown RBP8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Lysmd2Q9D7V2 215 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Igkv6-25A0A140T8N7 115 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Bcat2O35855 393 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Jmjd7P0C872 316 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 MdkP12025 140 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Fcer1gP20491 86 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 TspoP50637 169 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Dhrs13Q5SS80 376 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Pif1Q80SX8 650 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Foxn4Q8K3Q3 521 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Vmn1r4Q8R2D3 297 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr1324Q8VEU7 332 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 BmfQ91ZE9 185 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Zfp958Q99LG7 467 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Rps21Q9CQR2 83 aaKnown RBP8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Fbxw4Q9JMJ2 410 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Fbp1Q9QXD6 338 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Efemp2Q9WVJ9 443 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Fam208bQ5DTT3 2382 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Abca1P41233 2261 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 A630095N17RikJ3KMM7 116 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 P01746 140 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Fgf8P37237 268 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Slc25a4P48962 298 aaKnown RBP8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tcl1b1P56840 116 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Rac3P60764 192 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Crisp3Q03402 241 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Nkpd1Q0VF94 599 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Prrc1Q3UPH1 443 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Rph3alQ768S4 302 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Mob3aQ8BSU7 217 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Parp11Q8CFF0 331 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 C1saQ8CG14 688 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr1239Q8VGM8 305 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Cisd2Q9CQB5 135 aaKnown RBP8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Plekha2Q9ERS5 425 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Opn4Q9QXZ9 521 aa8.24□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gm20815J3KMI0 227 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gm20914J3QME2 227 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Efna4O08542 206 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Smr2O09133 150 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Mtatp6P00848 226 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 H2-Ab1P01921 265 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 P06344 263 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Defa-rs1P17533 116 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 PpiaP17742 164 aaKnown RBP8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Thbs3Q05895 956 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gp49aQ61450 303 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gm21292Q78EE2 227 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr1386Q7TQT0 309 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Znf574Q8BY46 900 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Lyrm2Q8R033 88 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gkn3Q9D0T7 191 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Chst1Q9EQC0 411 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Irak1bp1Q9ESJ7 259 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Zfyve26Q5DU37 2529 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Scgb1b15A0A087WP50 93 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gm5890A0A140LI04 305 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Ly6g6fB2RXM6 300 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Wdfy1E9Q4P1 410 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Cdhr4H3BJZ2 783 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr905L7N1X5 310 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 RelP15307 587 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Pax9P47242 342 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 ElnP54320 860 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Ppp1ccP63087 323 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Zfp7Q3TFZ4 685 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Rnf224Q3UIW8 156 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 PnlipQ6P8U6 465 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr43Q7TRX1 313 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr403Q7TRX2 313 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 YbeyQ8CAV0 164 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tmem41bQ8K1A5 291 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Chrdl1Q920C1 447 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 MmachcQ9CZD0 279 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Mdp1Q9D967 164 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Wdr4Q9EP82 413 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tusc2Q9WVF8 110 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Lama2Q60675 3118 aaKnown RBP8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Cyb561d1A2AE42 229 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Gm16519F8VQK7 162 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Vmn1r167G3UW71 315 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Kcnk3O35111 409 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tcstv1O70619 171 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 AhsgP29699 345 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tnfrsf26P83626 204 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Smad4P97471 551 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 A3galt2Q3V1N9 370 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Il12rb1Q60837 738 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Kcnip4Q6PHZ8 250 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tm2d3Q8BJ83 261 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr720Q8VF37 316 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Olfr472Q8VG43 310 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Egln1Q91YE3 400 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Ms4a8Q99N10 290 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Atp23Q9CWQ3 201 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Sval1Q9D2X6 151 aa8.23□□□□□ -1.09
Col6a1-201ENSMUST00000001147 Tmbim7Q9D592 302 aa8.23□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 29.6 ms