RNA–Protein interactions for RNA: ENST00000641009.1

LINC00339-211, long intergenic non-protein coding RNA 339, humanhuman

Gene LINC00339, Length 1,450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-211ENST00000641009 HLA-DQB1P01920 261 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 PRH1P02810 166 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 IGHV4-30-4P0DP06 118 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 C10orf55Q5SWW7 151 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 SFXN4Q6P4A7 337 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 IL34Q6ZMJ4 242 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 TPRA1Q86W33 373 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 FCGR1BQ92637 280 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 USMG5Q96IX5 58 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 OR51E2Q9H255 320 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 DCSTAMPQ9H295 470 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 RNF167Q9H6Y7 350 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 SSR3Q9UNL2 185 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 RBMX2Q9Y388 322 aaKnown RBP10.62□□□□□ -0.71
LINC00339-211ENST00000641009 TENM2Q9NT68 2774 aa10.62□□□□□ -0.71
LINC00339-211ENST00000641009 C3orf84H3BNL1 204 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 ACTL6BO94805 426 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 CTXN2P0C2S0 81 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 SDC2P34741 201 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 GNG2P59768 71 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 RHOGP84095 191 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 MXD1Q05195 221 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 CDK10Q15131 360 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 RPEL1Q2QD12 228 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 CNIH2Q6PI25 160 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 VKORC1L1Q8N0U8 176 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 AKIP1Q9NQ31 210 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 SCGNO76038 276 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 CLEC2LP0C7M8 214 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 CD36P16671 472 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 ZNF45Q02386 682 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 MUC7Q8TAX7 377 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 GPHA2Q96T91 129 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 RHBDL2Q9NX52 303 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 ANXA10Q9UJ72 324 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 SPATA2Q9UM82 520 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 MRPS7Q9Y2R9 242 aaKnown RBP10.61□□□□□ -0.71
LINC00339-211ENST00000641009 PRELID3BQ9Y3B1 194 aa10.61□□□□□ -0.71
LINC00339-211ENST00000641009 LYSTQ99698 3801 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 CREBL2O60519 120 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-211ENST00000641009 CSN3P07498 182 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 EIF4EBP1Q13541 118 aaPredicted RBP10.6□□□□□ -0.71
LINC00339-211ENST00000641009 MMD2Q8IY49 270 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 OR5H6Q8NGV6 325 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 TCTEX1D2Q8WW35 142 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 SLC25A38Q96DW6 304 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 YTHDF1Q9BYJ9 559 aaKnown RBP10.6□□□□□ -0.71
LINC00339-211ENST00000641009 Q9H521 79 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 TAS2R8Q9NYW2 309 aa10.6□□□□□ -0.71
LINC00339-211ENST00000641009 SACSQ9NZJ4 4579 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 TRBV9A0A0B4J1U6 114 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 LOC100506127A0A0U1RQW1 187 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 IZUMO1RA6ND01 250 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 HMX3A6NHT5 357 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 FAM223BA6NKX1 122 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 BMPR1BO00238 502 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 SLC22A5O76082 557 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 PTHLHP12272 177 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 BRWD1-AS2P59051 145 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 EXOSC2Q13868 293 aaKnown RBP10.59□□□□□ -0.71
LINC00339-211ENST00000641009 TATDN3Q17R31 274 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 ZNF773Q6PK81 442 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 FAM223AQ8IWN6 122 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 SGPP2Q8IWX5 399 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 GVQW1Q8N7I0 195 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 SNAPC3Q92966 411 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 HSD17B10Q99714 261 aaKnown RBP10.59□□□□□ -0.71
LINC00339-211ENST00000641009 TM2D3Q9BRN9 247 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 C19orf73Q9NVV2 129 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
LINC00339-211ENST00000641009 TRAV18A0A075B6X5 111 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 H0Y980 276 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 KBTBD11O94819 623 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 OR2A4O95047 310 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 ATP5G2Q06055 141 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 CASC10Q5T4H9 136 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 IDNKQ5T6J7 187 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 C19orf35Q6ZS72 473 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 MFSD4AQ8N468 514 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 TTC9CQ8N5M4 171 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 OR4S2Q8NH73 311 aa10.58□□□□□ -0.72
LINC00339-211ENST00000641009 A8MZ25 164 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 TEX22C9J3V5 150 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 E7EUB6 86 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 TNFSF12O43508 249 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 OR2J3O76001 311 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 FCER2P06734 321 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 ARPC4P59998 168 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 NEDD8Q15843 81 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 C15orf32Q32M92 178 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 LCN12Q6JVE5 192 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 PUSL1Q8N0Z8 303 aaKnown RBP10.57□□□□□ -0.72
LINC00339-211ENST00000641009 NECAP1Q8NC96 275 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 BEST4Q8NFU0 473 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 SECTM1Q8WVN6 248 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 OR2A7Q96R45 310 aa10.57□□□□□ -0.72
LINC00339-211ENST00000641009 THAP7Q9BT49 309 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms