RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 ZNF414Q96IQ9 312 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 A0A1B0GWB2 263 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 H0YIZ8 118 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 GOSR1O95249 250 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 RELQ04864 619 aaPredicted RBP7.65□□□□□ -1.18
VCL-206ENST00000623461 MAFAQ8NHW3 353 aaPredicted RBP7.65□□□□□ -1.18
VCL-206ENST00000623461 GNB1LQ9BYB4 327 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 COL11A2P13942 1736 aaPredicted RBP7.65□□□□□ -1.18
VCL-206ENST00000623461 A6NNC1 897 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 GNG7O60262 68 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 EMP1P54849 157 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 MYO7BQ6PIF6 2116 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 TTC9CQ8N5M4 171 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 ZNF257Q9Y2Q1 563 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 CHD5Q8TDI0 1954 aa7.65□□□□□ -1.18
VCL-206ENST00000623461 LCTP09848 1927 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 ZG16O60844 167 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 CA1P00915 261 aaPredicted RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 CD40P25942 277 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 SOX8P57073 446 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 TMEM56-RWDD3S4R434 201 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 PI4KAP42356 2102 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 A0A1B0GW15 77 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 CCL7P80098 99 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 TNFAIP6P98066 277 aaPredicted RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 UBE2V1Q13404 147 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 ZNF658BQ4V348 819 aaPredicted RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 ST20Q9HBF5 79 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 ZNF324O75467 553 aaPredicted RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 CEACAM3P40198 252 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 GAS1P54826 345 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 RPL31P62899 125 aaKnown RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 C16orf47Q6ZP98 133 aaPredicted RBP7.65□□□□□ -1.19
VCL-206ENST00000623461 C1orf174Q8IYL3 243 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 ZNF502Q8TBZ5 544 aa7.65□□□□□ -1.19
VCL-206ENST00000623461 IGHV2-70P01814 119 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 SRFP11831 508 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 MBD3L1Q8WWY6 194 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 RTN4RQ9BZR6 473 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 RAB1BQ9H0U4 201 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 PILRAQ9UKJ1 303 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 DOCK3Q8IZD9 2030 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 TBR1Q16650 682 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 WNT16Q9UBV4 365 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 C17orf51A8MQB3 221 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 FOXS1O43638 330 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 SMIM10L1P0DMW3 83 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 TDGF1P3P51864 188 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 HSPE1P61604 102 aaKnown RBP7.64□□□□□ -1.19
VCL-206ENST00000623461 SPANXN1Q5VSR9 72 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 CTHRC1Q96CG8 243 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 SMIM10Q96HG1 83 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 ABCA1O95477 2261 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 TRAV30A0A087WSZ9 112 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 TRAV1-1A0A0B4J248 108 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 TRGV8A0A0C4DH27 118 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 MEF2CQ06413 473 aaPredicted RBP7.64□□□□□ -1.19
VCL-206ENST00000623461 ZXDCQ2QGD7 858 aaPredicted RBP7.64□□□□□ -1.19
VCL-206ENST00000623461 TIMM23BQ5SRD1 257 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 MUC15Q8N387 334 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 ZNF525Q8N782 197 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 COPS9Q8WXC6 57 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 MMDQ15546 238 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 GFI1BQ5VTD9 330 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 GCSAMQ8N6F7 178 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 MS4A6AQ9H2W1 248 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 AKIRIN1Q9H9L7 192 aaPredicted RBP7.64□□□□□ -1.19
VCL-206ENST00000623461 ELOVL5Q9NYP7 299 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 ITGBL1O95965 494 aaPredicted RBP7.64□□□□□ -1.19
VCL-206ENST00000623461 PSG4Q00888 419 aa7.64□□□□□ -1.19
VCL-206ENST00000623461 SCGB1A1P11684 91 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 RIPPLY3P57055 190 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 HYAL1Q12794 435 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 GATAD1Q8WUU5 269 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 TMEM208Q9BTX3 173 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 H3BUT2 72 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 IL11P20809 199 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 TCF23Q7RTU1 214 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 TMEM262E9PQX1 116 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 LIFP15018 202 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 IL9P15248 144 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 NABP2Q9BQ15 211 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 DLL3Q9NYJ7 618 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 A0A1W2PPE3 182 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 C7orf71A4D174 169 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 A8MWP6 167 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 OR2H2O95918 312 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 ASCL5Q7RTU5 278 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 STPG3Q8N7X2 389 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 RBFOX2O43251 390 aaKnown RBP eCLIP7.63□□□□□ -1.19
VCL-206ENST00000623461 NACAE9PAV3 2078 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 SPTBN1Q01082 2364 aaKnown RBP7.63□□□□□ -1.19
VCL-206ENST00000623461 MGPP08493 103 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 LRTM2Q8N967 370 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 WDR31Q8NA23 367 aa7.63□□□□□ -1.19
VCL-206ENST00000623461 TMSB15BA0A087X1C1 80 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 TFPI2P48307 235 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 SSPNQ14714 243 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ZNF146Q15072 292 aa7.62□□□□□ -1.19
VCL-206ENST00000623461 ADIPOQQ15848 244 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms