RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 H7C2Y5 167 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 COL8A1P27658 744 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 HTR2BP41595 481 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 TAS2R30P59541 319 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 CLEC9AQ6UXN8 241 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 OR4P4Q8NGL7 312 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 OR4A16Q8NH70 328 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 SCARB1Q8WTV0 552 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 LHX4Q969G2 390 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 MARVELD3Q96A59 401 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 SMIM8Q96KF7 97 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 RBKSQ9H477 322 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 IGSF23A1L1A6 192 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 VWC2LB2RUY7 222 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 TPT1P13693 172 aaKnown RBP17.51■□□□□ 0.39
USP6NL-204ENST00000606752 MC5RP33032 325 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 ZNF787Q6DD87 383 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 PDPNQ86YL7 162 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 OSR1Q8TAX0 266 aaPredicted RBP17.51■□□□□ 0.39
USP6NL-204ENST00000606752 PHYHIPLQ96FC7 376 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 PERPQ96FX8 193 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 BSCL2Q96G97 398 aaPredicted RBP17.51■□□□□ 0.39
USP6NL-204ENST00000606752 GSX2Q9BZM3 304 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 UNKLQ9H9P5 680 aaKnown RBP17.51■□□□□ 0.39
USP6NL-204ENST00000606752 CACFD1Q9UGQ2 172 aa17.51■□□□□ 0.39
USP6NL-204ENST00000606752 IGHV2-70DA0A0C4DH43 119 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 FOXH1O75593 365 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 IAPPP10997 89 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 RELBQ01201 579 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 OR4A47Q6IF82 309 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 BAP18Q8IXM2 172 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 FLYWCH2Q96CP2 140 aaKnown RBP17.5■□□□□ 0.39
USP6NL-204ENST00000606752 QTRT1Q9BXR0 403 aaKnown RBP17.5■□□□□ 0.39
USP6NL-204ENST00000606752 SMIM3Q9BZL3 60 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 PSENENQ9NZ42 101 aa17.5■□□□□ 0.39
USP6NL-204ENST00000606752 UTP20O75691 2785 aaKnown RBP17.5■□□□□ 0.39
USP6NL-204ENST00000606752 SHOXO15266 292 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 GAPDHP04406 335 aaKnown RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 RAB13P51153 203 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 EIF5AP63241 154 aaKnown RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 BAXQ07812 192 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 TMEM177Q53S58 311 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 OR4C13Q8NGP0 309 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 WASHC3Q9Y3C0 194 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 SRRM4A7MD48 611 aaKnown RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 LY6LH3BQJ8 138 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 TXNL1O43396 289 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 JTBO76095 146 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 DSCR9P59020 149 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 OR2B8PP59922 312 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 RPL7L1Q6DKI1 246 aaKnown RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 OR52E5Q8NH55 327 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 RBMXL1Q96E39 390 aaKnown RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 MMP26Q9NRE1 261 aa17.49■□□□□ 0.39
USP6NL-204ENST00000606752 POLR3KQ9Y2Y1 108 aaPredicted RBP17.49■□□□□ 0.39
USP6NL-204ENST00000606752 TRAV3A0A0B4J244 114 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 ARG1P05089 322 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 IL6RP08887 468 aaPredicted RBP17.48■□□□□ 0.39
USP6NL-204ENST00000606752 HCP5Q6MZN7 132 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 ZNF429Q86V71 674 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 INSIG2Q9Y5U4 225 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 MED13LQ71F56 2210 aa17.48■□□□□ 0.39
USP6NL-204ENST00000606752 IGHV4-61A0A0C4DH41 118 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 H3BP45 60 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 IFNA17P01571 189 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 RAB14P61106 215 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 VMO1Q7Z5L0 202 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 RPEQ96AT9 228 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 HARBI1Q96MB7 349 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 CIB3Q96Q77 187 aaPredicted RBP17.47■□□□□ 0.39
USP6NL-204ENST00000606752 SIRPDQ9H106 197 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 IGHV4-30-2A0A087WSY4 118 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 CEBPZOSA8MTT3 80 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 CST7O76096 145 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 HTR1DP28221 377 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 SPCS3P61009 180 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 PDLIM3Q53GG5 364 aaPredicted RBP17.47■□□□□ 0.39
USP6NL-204ENST00000606752 STX12Q86Y82 276 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 DTD1Q8TEA8 209 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 WFDC1Q9HC57 220 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 DPM3Q9P2X0 92 aa17.47■□□□□ 0.39
USP6NL-204ENST00000606752 USP9YO00507 2555 aaPredicted RBP17.46■□□□□ 0.39
USP6NL-204ENST00000606752 IGHV1-3A0A0C4DH29 117 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 C15orf61A6NNL5 157 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 LEUTXA8MZ59 168 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 SULT1A1P50225 295 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 RPS16P62249 146 aaKnown RBP17.46■□□□□ 0.39
USP6NL-204ENST00000606752 CLLU1Q5K131 121 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 SLC7A5P1Q8MH63 180 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 UBAC2Q8NBM4 344 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 TMEM14BQ9NUH8 114 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 BET1LQ9NYM9 111 aa17.46■□□□□ 0.39
USP6NL-204ENST00000606752 FOXA2Q9Y261 457 aaPredicted RBP17.46■□□□□ 0.39
USP6NL-204ENST00000606752 CRYBG3Q68DQ2 2970 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 BORCS7-ASMTA0A0B4J1R7 106 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 ODF3BA8MYP8 253 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 FAM157AC9JC47 383 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 UPK2O00526 184 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 LY86O95711 162 aa17.45■□□□□ 0.38
USP6NL-204ENST00000606752 KLRD1Q13241 179 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms