RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 DPF1Q92782 380 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 PRR25Q96S07 402 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 SLA2Q9H6Q3 261 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 DIABLOQ9NR28 239 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 TAS2R8Q9NYW2 309 aa9.34□□□□□ -0.91
LIG1-217ENST00000599165 MSGN1A6NI15 193 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 E7EUB6 86 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 H3BUA1 57 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 OVOL1O14753 267 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 CNIH1O95406 144 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 PPYP01298 95 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 TRBV12-3P01733 135 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 ZNF45Q02386 682 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 CDK10Q15131 360 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 MSMO1Q15800 293 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 CTF1Q16619 201 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 VMA21Q3ZAQ7 101 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 CROCCP3Q8IVE0 287 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 PUSL1Q8N0Z8 303 aaKnown RBP9.33□□□□□ -0.92
LIG1-217ENST00000599165 MFSD4AQ8N468 514 aa9.33□□□□□ -0.92
LIG1-217ENST00000599165 HSD17B10Q99714 261 aaKnown RBP9.33□□□□□ -0.92
LIG1-217ENST00000599165 TINAGL1Q9GZM7 467 aaPredicted RBP9.33□□□□□ -0.92
LIG1-217ENST00000599165 CGB1A6NKQ9 187 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 TEX22C9J3V5 150 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 TNFSF12O43508 249 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 RAMP3O60896 148 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 SLC22A5O76082 557 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 HSPB1P04792 205 aaKnown RBP9.32□□□□□ -0.92
LIG1-217ENST00000599165 MYOD1P15172 320 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 NAT1P18440 290 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 ECI1P42126 302 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 ARPC4P59998 168 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 TNXAQ16473 311 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 DEFB121Q5J5C9 76 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 ACSM6Q6P461 480 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 C19orf35Q6ZS72 473 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 OR5AP2Q8NGF4 316 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 SECTM1Q8WVN6 248 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 TCTEX1D2Q8WW35 142 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 GIMAP1Q8WWP7 306 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 S100A16Q96FQ6 103 aaKnown RBP9.32□□□□□ -0.92
LIG1-217ENST00000599165 TMEM68Q96MH6 324 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 B9D2Q9BPU9 175 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 VCX3AQ9NNX9 186 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 ADAM30Q9UKF2 790 aa9.32□□□□□ -0.92
LIG1-217ENST00000599165 GABARAPO95166 117 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 PRH1P02810 166 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 IL6RP08887 468 aaPredicted RBP9.31□□□□□ -0.92
LIG1-217ENST00000599165 RFX2P48378 723 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 CBX3Q13185 183 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 TMEM69Q5SWH9 247 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 ZNF343Q6P1L6 599 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 IL34Q6ZMJ4 242 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 ZNF66Q6ZN08 573 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 ZNF818PQ6ZRF7 136 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 LYSMD2Q8IV50 215 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 TMEM167AQ8TBQ9 72 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 ACOT12Q8WYK0 555 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 KCTD12Q96CX2 325 aaKnown RBP9.31□□□□□ -0.92
LIG1-217ENST00000599165 ZNF355PQ9NSJ1 428 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 PRELID3BQ9Y3B1 194 aa9.31□□□□□ -0.92
LIG1-217ENST00000599165 STAB2Q8WWQ8 2551 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 TRBV9A0A0B4J1U6 114 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 HMX3A6NHT5 357 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 KBTBD11O94819 623 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 OR9G9P0C7N8 305 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 ELK1P19419 428 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 GNRHRP30968 328 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 CBX5P45973 191 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 INSL3P51460 131 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 FXYD4P59646 89 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 DHRS11Q6UWP2 260 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 HAPLN4Q86UW8 402 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 ANKRD13BQ86YJ7 626 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 MMD2Q8IY49 270 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 TTC9CQ8N5M4 171 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 OR4S2Q8NH73 311 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 GPX8Q8TED1 209 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 DCUN1D5Q9BTE7 237 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 SLC5A7Q9GZV3 580 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 FXYD6Q9H0Q3 95 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 AKIP1Q9NQ31 210 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 COMMD3Q9UBI1 195 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
LIG1-217ENST00000599165 MRPS7Q9Y2R9 242 aaKnown RBP9.3□□□□□ -0.92
LIG1-217ENST00000599165 DMRT1Q9Y5R6 373 aa9.3□□□□□ -0.92
LIG1-217ENST00000599165 KMT2CQ8NEZ4 4911 aaKnown RBP9.29□□□□□ -0.92
LIG1-217ENST00000599165 TRAV3A0A0B4J244 114 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 ANKRD34BA5PLL1 514 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 SULT1C2O00338 296 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 RBFOX2O43251 390 aaKnown RBP eCLIP9.29□□□□□ -0.924e-6■□□□□ 9.1
LIG1-217ENST00000599165 HPGDSO60760 199 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 OR2A4O95047 310 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 APOA1P02647 267 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 PMP2P02689 132 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 ZNF735P0CB33 412 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 SPNP16150 400 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 ALDH3B2P48448 385 aa9.29□□□□□ -0.92
LIG1-217ENST00000599165 KLF5Q13887 457 aaPredicted RBP9.29□□□□□ -0.92
LIG1-217ENST00000599165 POU2AF1Q16633 256 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms