RNA–Protein interactions for RNA: ENST00000590550.6

MBD3-207, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2 BASIC

Gene MBD3, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-207ENST00000590550 SLC25A40Q8TBP6 338 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 MBD3L1Q8WWY6 194 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 ALKBH7Q9BT30 221 aaPredicted RBP16.09■□□□□ 0.17
MBD3-207ENST00000590550 KLF13Q9Y2Y9 288 aaPredicted RBP16.09■□□□□ 0.17
MBD3-207ENST00000590550 C21orf140B9A014 251 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 KRASP01116 189 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 TPRX1Q8N7U7 411 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 HIPK2Q9H2X6 1198 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 FZR1Q9UM11 496 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 UBE2L5PA0A1B0GUS4 154 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 CD59P13987 128 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 ADMP35318 185 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 RANP62826 216 aaKnown RBP16.09■□□□□ 0.17
MBD3-207ENST00000590550 SLC39A9Q9NUM3 307 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 RNF24Q9Y225 148 aa16.09■□□□□ 0.17
MBD3-207ENST00000590550 TRGV5A0A0B4J1U4 118 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 RPL15P61313 204 aaKnown RBP16.08■□□□□ 0.16
MBD3-207ENST00000590550 ZNF816Q0VGE8 651 aaPredicted RBP16.08■□□□□ 0.16
MBD3-207ENST00000590550 FGFRL1Q8N441 504 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 DEFB123Q8N688 67 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 OR4C12Q96R67 309 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 MAP1BP46821 2468 aaKnown RBP16.08■□□□□ 0.16
MBD3-207ENST00000590550 MPV17P39210 176 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 KLF3P57682 345 aaPredicted RBP16.08■□□□□ 0.16
MBD3-207ENST00000590550 ARG2P78540 354 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 OR52L2PQ8NGH6 319 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 AGMATQ9BSE5 352 aa16.08■□□□□ 0.16
MBD3-207ENST00000590550 FAM103A1Q9BTL3 118 aaKnown RBP16.08■□□□□ 0.16
MBD3-207ENST00000590550 LRP5LA4QPB2 252 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 AGFG2O95081 481 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 TYMSP04818 313 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 G6PCP35575 357 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 TPPP2P59282 170 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 ERVK11-1P61568 191 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 AESQ08117 197 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 PSG7Q13046 419 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 SPINK9Q5DT21 86 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 VHLLQ6RSH7 139 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 CENPVQ7Z7K6 275 aaPredicted RBP16.07■□□□□ 0.16
MBD3-207ENST00000590550 NANOS1Q8WY41 292 aaKnown RBP16.07■□□□□ 0.16
MBD3-207ENST00000590550 IMMP2LQ96T52 175 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 RP1L1Q8IWN7 2480 aaPredicted RBP16.07■□□□□ 0.16
MBD3-207ENST00000590550 M0QZ24 198 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 CLDN1O95832 211 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 IGHV1-2P23083 117 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 RPL30P62888 115 aaKnown RBP16.07■□□□□ 0.16
MBD3-207ENST00000590550 UNQ5815/PRO19632Q6UWF5 114 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 ANAPC16Q96DE5 110 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 C5orf30Q96GV9 206 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 OR2D2Q9H210 308 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 SLC25A22Q9H936 323 aa16.07■□□□□ 0.16
MBD3-207ENST00000590550 EGR1P18146 543 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 BMP5P22003 454 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 SRP14P37108 136 aaKnown RBP16.06■□□□□ 0.16
MBD3-207ENST00000590550 LSM10Q969L4 123 aaKnown RBP16.06■□□□□ 0.16
MBD3-207ENST00000590550 TXN2Q99757 166 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 OBP2BQ9NPH6 170 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 LIN7CQ9NUP9 197 aaKnown RBP16.06■□□□□ 0.16
MBD3-207ENST00000590550 PXMP4Q9Y6I8 212 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 CDX4O14627 284 aaPredicted RBP16.06■□□□□ 0.16
MBD3-207ENST00000590550 CD46P15529 392 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 KRTDAPP60985 99 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 ATP6V1FQ16864 119 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 CADP27708 2225 aa16.06■□□□□ 0.16
MBD3-207ENST00000590550 SERF1AO75920 110 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 HAND1O96004 215 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 IGKV1D-33P01593 117 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 IGKV1-33P01594 117 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 DEFA4P12838 97 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 PSMB3P49720 205 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 UBE2NP61088 152 aaKnown RBP16.05■□□□□ 0.16
MBD3-207ENST00000590550 HES3Q5TGS1 186 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 PLPPR2Q96GM1 343 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 BTF3L4Q96K17 158 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 SAMD10Q9BYL1 202 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 RYDENQ9NUL5 291 aaKnown RBP16.05■□□□□ 0.16
MBD3-207ENST00000590550 CLN8Q9UBY8 286 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 ICE1Q9Y2F5 2266 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 CNOT1A5YKK6 2376 aaKnown RBP16.05■□□□□ 0.16
MBD3-207ENST00000590550 CACNA1HO95180 2353 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 IGHV3-43A0A0B4J1X8 118 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 C1QTNF9BB2RNN3 333 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 NPIPB11E5RHQ5 1161 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 SH2D1BO14796 132 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 IGHV3-43DP0DP04 118 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 SLC25A6P12236 298 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 ZNF766Q5HY98 468 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 Q6ZN92 141 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 Q6ZR03 302 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 ZDHHC11Q9H8X9 412 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 TP53TG3Q9ULZ0 132 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 POLDIP2Q9Y2S7 368 aa16.05■□□□□ 0.16
MBD3-207ENST00000590550 LOC105371242A0A075B767 164 aa16.04■□□□□ 0.16
MBD3-207ENST00000590550 SRSF6Q13247 344 aaKnown RBP16.04■□□□□ 0.16
MBD3-207ENST00000590550 RFESDQ8TAC1 157 aa16.04■□□□□ 0.16
MBD3-207ENST00000590550 VPS25Q9BRG1 176 aa16.04■□□□□ 0.16
MBD3-207ENST00000590550 RNF114Q9Y508 228 aa16.04■□□□□ 0.16
MBD3-207ENST00000590550 C12orf77C9JDV5 145 aa16.04■□□□□ 0.16
MBD3-207ENST00000590550 HINT1P49773 126 aaPredicted RBP16.04■□□□□ 0.16
MBD3-207ENST00000590550 LRRC75BQ2VPJ9 315 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms