RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 RP1L1Q8IWN7 2480 aaPredicted RBP12.58□□□□□ -0.4
MBD1-217ENST00000588937 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 RPS10P5Q9NQ39 176 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 TMEM106BQ9NUM4 274 aa12.58□□□□□ -0.4
MBD1-217ENST00000588937 CD3EP07766 207 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 DAOP14920 347 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 FGF7P21781 194 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 PAX6P26367 422 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 APOBEC3AP31941 199 aaPredicted RBP12.57□□□□□ -0.4
MBD1-217ENST00000588937 CA7P43166 264 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 OR2B8PP59922 312 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 AWAT1Q58HT5 328 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 SLC25A48Q6ZT89 311 aaKnown RBP12.57□□□□□ -0.4
MBD1-217ENST00000588937 TGIF2LYQ8IUE0 185 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 ZNF709Q8N972 641 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 RAB39BQ96DA2 213 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 TMEM140Q9NV12 185 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 DCAF16Q9NXF7 216 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 USF3Q68DE3 2245 aa12.57□□□□□ -0.4
MBD1-217ENST00000588937 POLEQ07864 2286 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 A0A1W2PPE3 182 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 E7EQL1 145 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 C17orf112F2Z3M2 114 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 SOX15O60248 233 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 HRASP01112 189 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 SRP19P09132 144 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 RELBQ01201 579 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 FLI1Q01543 452 aaPredicted RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 ICAM4Q14773 271 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 EFNB3Q15768 340 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 HFEQ30201 348 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 AKIRIN2Q53H80 203 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 ZCCHC24Q8N2G6 241 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 C15orf54Q8N8G6 183 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 OR10G4Q8NGN3 311 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 RCC1LQ96I51 464 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 ZNF251Q9BRH9 671 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 AIFM2Q9BRQ8 373 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 TUBA4BQ9H853 241 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 PKD1L2Q7Z442 2459 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 LOC102723971A0A1B0GUV8 181 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 C7orf77A4D0Y5 90 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 C15orf62A8K5M9 175 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 B9A039 149 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 NDUFB3O43676 98 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 IFNA1P01562 189 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 ARG1P05089 322 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 SNRNP70P08621 437 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 RPL31P62899 125 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 FBXL19-AS1Q494R0 122 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 LRRC10Q5BKY1 277 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 SPINK9Q5DT21 86 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 RXFP4Q8TDU9 374 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 CCL17Q92583 94 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 ZNF714Q96N38 554 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 GGACTQ9BVM4 153 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 VSIRQ9H7M9 311 aa12.56□□□□□ -0.4
MBD1-217ENST00000588937 CISD1Q9NZ45 108 aaKnown RBP12.56□□□□□ -0.4
MBD1-217ENST00000588937 USP24Q9UPU5 2620 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 NDUFA2O43678 99 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 CHRNB4P30926 498 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 GNG10P50151 68 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 ELLP55199 621 aaPredicted RBP12.55□□□□□ -0.4
MBD1-217ENST00000588937 RAB11AP62491 216 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 PMS2P11Q13670 270 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 POU2AF1Q16633 256 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 RTL8BQ17RB0 113 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 FAM122CQ6P4D5 195 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 LCN15Q6UWW0 184 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 DMRTC2Q8IXT2 367 aaPredicted RBP12.55□□□□□ -0.4
MBD1-217ENST00000588937 ZNF383Q8NA42 475 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
MBD1-217ENST00000588937 SLC39A9Q9NUM3 307 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 GNG13Q9P2W3 67 aa12.55□□□□□ -0.4
MBD1-217ENST00000588937 MAP1LC3B2A6NCE7 125 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 C15orf61A6NNL5 157 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 ATXN7O15265 892 aaPredicted RBP12.54□□□□□ -0.4
MBD1-217ENST00000588937 IFNA10P01566 189 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 ZNF726P1Q15940 193 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 HEPN1Q6WQI6 88 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 C1orf229Q6ZS94 237 aaPredicted RBP12.54□□□□□ -0.4
MBD1-217ENST00000588937 VKORC1L1Q8N0U8 176 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 RHOVQ96L33 236 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 P2RX4Q99571 388 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 MAP1LC3BQ9GZQ8 125 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 MLXQ9UH92 298 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 FOXA2Q9Y261 457 aaPredicted RBP12.54□□□□□ -0.4
MBD1-217ENST00000588937 HCFC1P51610 2035 aa12.54□□□□□ -0.4
MBD1-217ENST00000588937 ITPR1Q14643 2758 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 TNFRSF13BO14836 293 aaPredicted RBP12.53□□□□□ -0.4
MBD1-217ENST00000588937 MPDU1O75352 247 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 MMP23AO75900 390 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 BCL2P10415 239 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 VDAC2P45880 294 aaPredicted RBP12.53□□□□□ -0.4
MBD1-217ENST00000588937 HOXA1P49639 335 aaPredicted RBP12.53□□□□□ -0.4
MBD1-217ENST00000588937 UTF1Q5T230 341 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 OR4A47Q6IF82 309 aa12.53□□□□□ -0.4
MBD1-217ENST00000588937 RBMS3Q6XE24 437 aaKnown RBP12.53□□□□□ -0.4
MBD1-217ENST00000588937 NPCDR1Q9BY65 106 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms