RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 OPCMLQ14982 345 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 TPTE2P1Q5T6R2 138 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 HIST2H2BCQ6DN03 193 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 PRSS57Q6UWY2 283 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 FOXRED2Q8IWF2 684 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 RHOVQ96L33 236 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 AIFM2Q9BRQ8 373 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 SLA2Q9H6Q3 261 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 DPM3Q9P2X0 92 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 HSPB7Q9UBY9 170 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 WASHC3Q9Y3C0 194 aa11.32□□□□□ -0.6
UBBP4-202ENST00000584755 MED13LQ71F56 2210 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 CSMD2Q7Z408 3487 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 IGHV1-3A0A0C4DH29 117 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 MSGN1A6NI15 193 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 OR9G9P0C7N8 305 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 HKR1P10072 659 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 P2RY1P47900 373 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 UBE2E1P51965 193 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 MINOS1Q5TGZ0 78 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 OR4C13Q8NGP0 309 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 LHX4Q969G2 390 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 RPEQ96AT9 228 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 ARL6Q9H0F7 186 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 TMEM140Q9NV12 185 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 MINOS1-NBL1R4GNA1 71 aa11.31□□□□□ -0.6
UBBP4-202ENST00000584755 A0A1W2PPI3 338 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 SRRM4A7MD48 611 aaKnown RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 RGS13O14921 159 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 KCNAB3O43448 404 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 CHST1O43916 411 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 PVALBP20472 110 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 NUP62P37198 522 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 CEACAM3P40198 252 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 PAX9P55771 341 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 RELBQ01201 579 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 TNFRSF9Q07011 255 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 LOXL1Q08397 574 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 PDLIM3Q53GG5 364 aaPredicted RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 GPR157Q5UAW9 335 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 OR4A47Q6IF82 309 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 ZNF429Q86V71 674 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 VKORC1L1Q8N0U8 176 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 FLYWCH2Q96CP2 140 aaKnown RBP11.3□□□□□ -0.6
UBBP4-202ENST00000584755 RAB40CQ96S21 281 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 MAGT1Q9H0U3 335 aa11.3□□□□□ -0.6
UBBP4-202ENST00000584755 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 B4DSR2 109 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 H7C2Y5 167 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 SYNGR2O43760 224 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 SSSCA1O60232 199 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 TMEM50AO95807 157 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 MSMBP08118 114 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 RPL12P30050 165 aaKnown RBP11.29□□□□□ -0.6
UBBP4-202ENST00000584755 SSX9Q7RTT3 188 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 KRTAP1-3Q8IUG1 177 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 PUSL1Q8N0Z8 303 aaKnown RBP11.29□□□□□ -0.6
UBBP4-202ENST00000584755 OR8H3Q8N146 312 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 OR52E5Q8NH55 327 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 LPAR2Q9HBW0 351 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 LYRM2Q9NU23 88 aaPredicted RBP11.29□□□□□ -0.6
UBBP4-202ENST00000584755 BET1LQ9NYM9 111 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 CACFD1Q9UGQ2 172 aa11.29□□□□□ -0.6
UBBP4-202ENST00000584755 TBL2Q9Y4P3 447 aaKnown RBP11.29□□□□□ -0.6
UBBP4-202ENST00000584755 TRAV3A0A0B4J244 114 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 C15orf61A6NNL5 157 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 WRBO00258 174 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 SHOXO15266 292 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 BCL2L11O43521 198 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 GPR137BO60478 399 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 MED6O75586 246 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 NXPH3O95157 252 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 IGLV2-23P01705 113 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 AP2S1P53680 142 aaPredicted RBP11.28□□□□□ -0.6
UBBP4-202ENST00000584755 TAS2R30P59541 319 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 UBE2KP61086 200 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 Q5PR19 223 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 LHFPL4Q7Z7J7 247 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 CFHR4Q92496 578 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 HARBI1Q96MB7 349 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 TMEM14BQ9NUH8 114 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 WSB1Q9Y6I7 421 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 WNK2Q9Y3S1 2297 aa11.28□□□□□ -0.6
UBBP4-202ENST00000584755 TRAV20A0A0B4J274 112 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 UPK2O00526 184 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 FGF2P09038 288 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 SAA1P0DJI8 122 aaPredicted RBP11.27□□□□□ -0.6
UBBP4-202ENST00000584755 GATA3P23771 443 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 CD1BP29016 333 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 LGALS7P47929 136 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 OR2C3Q8N628 320 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 OR4A16Q8NH70 328 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 RBMXL1Q96E39 390 aaKnown RBP11.27□□□□□ -0.6
UBBP4-202ENST00000584755 AJUBAQ96IF1 538 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 SMIM8Q96KF7 97 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 RNF5Q99942 180 aa11.27□□□□□ -0.6
UBBP4-202ENST00000584755 QTRT1Q9BXR0 403 aaKnown RBP11.27□□□□□ -0.6
UBBP4-202ENST00000584755 MS4A7Q9GZW8 240 aaPredicted RBP11.27□□□□□ -0.6
UBBP4-202ENST00000584755 RBKSQ9H477 322 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms