RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 LAIR2Q6ISS4 152 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 MRPL52Q86TS9 123 aaKnown RBP1.33□□□□□ -2.2
PALB2-203ENST00000565038 CRLF3Q8IUI8 442 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 C17orf78Q8N4C9 275 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 OR2M3Q8NG83 312 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 OR5C1Q8NGR4 320 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 RNASE11Q8TAA1 199 aaKnown RBP1.33□□□□□ -2.2
PALB2-203ENST00000565038 ERMNQ8TAM6 284 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 KLK6Q92876 244 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 DDIT4LQ96D03 193 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 ACBD6Q9BR61 282 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 TSSK6Q9BXA6 273 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 POTEKPQ9BYX7 375 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 OR2D2Q9H210 308 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 PARVGQ9HBI0 331 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 SPACA1Q9HBV2 294 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 KCNIP2Q9NS61 270 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 CD300AQ9UGN4 299 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 ITPR1Q14643 2758 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 IGSF10Q6WRI0 2623 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 PLXNA4Q9HCM2 1894 aa1.33□□□□□ -2.2
PALB2-203ENST00000565038 CFAP46Q8IYW2 2715 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 A0A1B0GX12 115 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 TOR1AO14656 332 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 EEF1E1O43324 174 aaKnown RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 MPZL2O60487 215 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 POP7O75817 140 aaKnown RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 ATP6V1G2O95670 118 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 CA2P00918 260 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 HLA-DRAP01903 254 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 GP1BAP07359 652 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 LIMS3P0CW19 117 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 LIMS4P0CW20 117 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 PET100P0DJ07 73 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 CNTFRP26992 372 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 ELK4P28324 431 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 KDELR2P33947 212 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 RAB2AP61019 212 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 DEFA6Q01524 100 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 CASP8Q14790 479 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 ZNHIT3Q15649 155 aaPredicted RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 SYPL2Q5VXT5 272 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 CLEC20AQ6ZU45 233 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 SSX7Q7RTT5 188 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 CD302Q8IX05 232 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 DNAAF3Q8N9W5 541 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 OR4A5Q8NH83 315 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 ANGPTL6Q8NI99 470 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 FAM45AQ8TCE6 357 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 SPPL2BQ8TCT7 592 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 WFDC5Q8TCV5 224 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 REEP6Q96HR9 211 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 TMEM56Q96MV1 263 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 BCL2L14Q9BZR8 327 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 SLC19A3Q9BZV2 496 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 METTL17Q9H7H0 456 aaPredicted RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 ASCL3Q9NQ33 180 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 COMMD9Q9P000 198 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 PLXNA3P51805 1871 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 PKD1L2Q7Z442 2459 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 MYH7P12883 1935 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 URB1O60287 2271 aaKnown RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 CSMD1Q96PZ7 3565 aa1.32□□□□□ -2.2
PALB2-203ENST00000565038 GCN1Q92616 2671 aaKnown RBP1.32□□□□□ -2.2
PALB2-203ENST00000565038 RELNP78509 3460 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 SIP14410 1827 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 HELZ2Q9BYK8 2649 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 MGAQ8IWI9 3026 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TRBV24-1A0A075B6N3 115 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 IGHV1-45A0A0A0MS14 117 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 FAM92AA1XBS5 289 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 IQCF5A8MTL0 148 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 GPR171O14626 319 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 POLR3GO15318 223 aaPredicted RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 SCN2BO60939 215 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 RAB36O95755 333 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 ASS1P00966 412 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 TNNC2P02585 160 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 GYPCP04921 128 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 APODP05090 189 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 GUSBP08236 651 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 HOXA6P31267 233 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 GABRA3P34903 492 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 MP68P56378 58 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 RPS24P62847 133 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 TSPAN31Q12999 210 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 SRSF6Q13247 344 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 PDGFRLQ15198 375 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 C9orf64Q5T6V5 341 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TTC33Q6PID6 262 aaPredicted RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 SCXQ7RTU7 201 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 FAM19A3Q7Z5A8 133 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 SLC25A45Q8N413 288 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 FER1L6-AS1Q8NA97 138 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TSTD1Q8NFU3 115 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 MFSD8Q8NHS3 518 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 PPWD1Q96BP3 646 aaKnown RBP1.31□□□□□ -2.2
PALB2-203ENST00000565038 LRRC45Q96CN5 670 aa1.31□□□□□ -2.2
PALB2-203ENST00000565038 TMA16Q96EY4 203 aaKnown RBP1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms