RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 TRIM64CA6NLI5 447 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 LINC00473A8K010 186 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 MPPED1O15442 326 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 TMEM127O75204 238 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 OR2A4O95047 310 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 SYNJ2BPP57105 145 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 ATP5G2Q06055 141 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 DYRK1AQ13627 763 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 TNXAQ16473 311 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 RPEL1Q2QD12 228 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 IL34Q6ZMJ4 242 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 NR2C2APQ86WQ0 139 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 SRSF12Q8WXF0 261 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 TM2D3Q9BRN9 247 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 AIFM2Q9BRQ8 373 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 DCUN1D5Q9BTE7 237 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 RSRP1Q9BUV0 290 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 OR51E2Q9H255 320 aa9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 RBMX2Q9Y388 322 aaKnown RBP9.31□□□□□ -0.92
GTF3C1-204ENST00000564664 RYR3Q15413 4870 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 IGKV1D-8A0A087WSZ0 117 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 A0A0A6YYH2 397 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 A6NJ64 397 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 FCGR3BO75015 233 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 TUSC2O75896 110 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 IGHV4-30-4P0DP06 118 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 MAS1LP35410 378 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 GNG2P59768 71 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 MSMO1Q15800 293 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 LCN12Q6JVE5 192 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 Q8N402 240 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 NECAP1Q8NC96 275 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 CITED4Q96RK1 184 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 ZNF430Q9H8G1 570 aaPredicted RBP9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
GTF3C1-204ENST00000564664 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 A6NHS1 94 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 CSN3P07498 182 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 SAA1P0DJI8 122 aaPredicted RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 NFYAP23511 347 aaPredicted RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 PSMB9P28065 219 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 MECP2P51608 486 aaKnown RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 RHOGP84095 191 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 CASC10Q5T4H9 136 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 SFXN4Q6P4A7 337 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 ZNF66Q6ZN08 573 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 KCTD9Q7L273 389 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 GTSCR1Q86UQ5 136 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 OR4S2Q8NH73 311 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 ACOT12Q8WYK0 555 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 KCTD12Q96CX2 325 aaKnown RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 OR2A7Q96R45 310 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 AKIP1Q9NQ31 210 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 DAPK2Q9UIK4 370 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 ELF5Q9UKW6 265 aaPredicted RBP9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 ZNF257Q9Y2Q1 563 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 ETV7Q9Y603 341 aa9.29□□□□□ -0.92
GTF3C1-204ENST00000564664 HRASP01112 189 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 IGLV2-14P01704 120 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 LYL1P12980 280 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 KIR2DS2P43631 304 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 IDO2Q6ZQW0 420 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 LAX1Q8IWV1 398 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 MFSD4AQ8N468 514 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 ZBTB34Q8NCN2 500 aa9.28□□□□□ -0.92
GTF3C1-204ENST00000564664 HUWE1Q7Z6Z7 4374 aaKnown RBP9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 TMEM235A6NFC5 223 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 NPIPB5A8MRT5 1133 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 DHFRP00374 187 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 SDC2P34741 201 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 EIF4EBP1Q13541 118 aaPredicted RBP9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 KLK9Q2XQG4 91 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 PUSL1Q8N0Z8 303 aaKnown RBP9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 OR4A5Q8NH83 315 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 TMEM167AQ8TBQ9 72 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 NUDCD2Q8WVJ2 157 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 SPATA25Q9BR10 227 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 THAP7Q9BT49 309 aaPredicted RBP9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 TUBA4BQ9H853 241 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 DIABLOQ9NR28 239 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 SLC2A9Q9NRM0 540 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 RHBDL2Q9NX52 303 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 KLK9Q9UKQ9 250 aa9.27□□□□□ -0.93
GTF3C1-204ENST00000564664 IGKV1D-13A0A0B4J2D9 117 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 DPPA5A6NC42 116 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 J3QRK9 145 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 LGALS9O00182 355 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 BMPR1BO00238 502 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 RBFOX2O43251 390 aaKnown RBP eCLIP9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 SSX5O60225 188 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 GGCTO75223 188 aaKnown RBP9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 RBMXL2O75526 392 aaKnown RBP9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 KBTBD11O94819 623 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 IFNA6P05013 189 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 CRYGCP07315 174 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 FGF2P09038 288 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 ZNF735P0CB33 412 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 APELAP0DMC3 54 aa9.26□□□□□ -0.93
GTF3C1-204ENST00000564664 IGKV1-13P0DP09 117 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms