RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 SHOXO15266 292 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 RBMXL2O75526 392 aaKnown RBP17.75■□□□□ 0.43
LINC01960-201ENST00000563759 DEDDO75618 318 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 CXorf66Q5JRM2 361 aaPredicted RBP17.75■□□□□ 0.43
LINC01960-201ENST00000563759 LDLRAD2Q5SZI1 272 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 KRTAP1-3Q8IUG1 177 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 LINC01356Q8N9X3 169 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 OR4C13Q8NGP0 309 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 OSR1Q8TAX0 266 aaPredicted RBP17.75■□□□□ 0.43
LINC01960-201ENST00000563759 HARBI1Q96MB7 349 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 TMEM140Q9NV12 185 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 HIF1ANQ9NWT6 349 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 COA4Q9NYJ1 87 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 TET2Q6N021 2002 aaPredicted RBP17.75■□□□□ 0.43
LINC01960-201ENST00000563759 IGHV3-72A0A0B4J1Y9 119 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 TRAV20A0A0B4J274 112 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 WRBO00258 174 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 PITX3O75364 302 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 FLYWCH2Q96CP2 140 aaKnown RBP17.75■□□□□ 0.43
LINC01960-201ENST00000563759 C1orf159Q96HA4 380 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 RNF126Q9BV68 326 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 AUP1Q9Y679 476 aa17.75■□□□□ 0.43
LINC01960-201ENST00000563759 PDZD2O15018 2839 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 MINOS1Q5TGZ0 78 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 LAMTOR1Q6IAA8 161 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 TMEM65Q6PI78 240 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 MAGT1Q9H0U3 335 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 PLSCR3Q9NRY6 295 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 TNFSF18Q9UNG2 199 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 BOLA1Q9Y3E2 137 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 MINOS1-NBL1R4GNA1 71 aa17.74■□□□□ 0.43
LINC01960-201ENST00000563759 A0A1W2PPI3 338 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 GATA3P23771 443 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 AP2S1P53680 142 aaPredicted RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 POLR2GP62487 172 aaKnown RBP eCLIP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 MIDNQ504T8 468 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 INO80EQ8NBZ0 244 aaPredicted RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 AIFM2Q9BRQ8 373 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 MFFQ9GZY8 342 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 RCL1Q9Y2P8 373 aaKnown RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 TBL2Q9Y4P3 447 aaKnown RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 ITPR3Q14573 2671 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 L7N2F9 121 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 SSSCA1O60232 199 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 OR9G9P0C7N8 305 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 LYL1P12980 280 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 LGALSLQ3ZCW2 172 aaPredicted RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 TMEM177Q53S58 311 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 OR4A47Q6IF82 309 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 OR8H3Q8N146 312 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 C7orf69Q9H7B7 122 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.73■□□□□ 0.43
LINC01960-201ENST00000563759 NSG2Q9Y328 171 aa17.73■□□□□ 0.43
LINC01960-201ENST00000563759 TNCP24821 2201 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 FAM90A9PA6NNJ1 464 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 RPS16P62249 146 aaKnown RBP17.72■□□□□ 0.43
LINC01960-201ENST00000563759 ID3Q02535 119 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 SSX2Q16385 188 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 CCDC144NLQ6NUI1 221 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 OR4A16Q8NH70 328 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 MS4A7Q9GZW8 240 aaPredicted RBP17.72■□□□□ 0.43
LINC01960-201ENST00000563759 SVEP1Q4LDE5 3571 aa17.72■□□□□ 0.43
LINC01960-201ENST00000563759 TRAV40A0A0B4J280 105 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 TIMM23O14925 209 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 SNAPC5O75971 98 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 CXCL2P19875 107 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 PVALBP20472 110 aaPredicted RBP17.71■□□□□ 0.43
LINC01960-201ENST00000563759 NUP62P37198 522 aaPredicted RBP17.71■□□□□ 0.43
LINC01960-201ENST00000563759 OR2B8PP59922 312 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 POU2AF1Q16633 256 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 CENPVL3A0A0U1RRI6 287 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 E5RGE8 158 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 KCNAB3O43448 404 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 SAA4P35542 130 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 ARHGDIBP52566 201 aa17.71■□□□□ 0.43
LINC01960-201ENST00000563759 ZANQ9Y493 2812 aa17.71■□□□□ 0.42
LINC01960-201ENST00000563759 SRRM4A7MD48 611 aaKnown RBP17.7■□□□□ 0.42
LINC01960-201ENST00000563759 FAM90A26D6RGX4 464 aa17.7■□□□□ 0.42
LINC01960-201ENST00000563759 NPFFO15130 113 aa17.7■□□□□ 0.42
LINC01960-201ENST00000563759 SAA1P0DJI8 122 aaPredicted RBP17.7■□□□□ 0.42
LINC01960-201ENST00000563759 TMEM249Q2WGJ8 235 aa17.7■□□□□ 0.42
LINC01960-201ENST00000563759 OOSP1A8MZH6 123 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 TGFAP01135 160 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 PAX6P26367 422 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 VAMP2P63027 116 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 ACOT7LQ6ZUV0 252 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 WFDC11Q8NEX6 87 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 C17orf50Q8WW18 174 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 RNF222A6NCQ9 220 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 ABCA1O95477 2261 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 IGHV4-31P0DP07 118 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 RELBQ01201 579 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 TNFRSF9Q07011 255 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 ZNF345Q14585 488 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 GPR157Q5UAW9 335 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 ARL6Q9H0F7 186 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 HSPB7Q9UBY9 170 aa17.69■□□□□ 0.42
LINC01960-201ENST00000563759 CELSR1Q9NYQ6 3014 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 IGHV3OR16-10A0A075B7F0 116 aa17.68■□□□□ 0.42
LINC01960-201ENST00000563759 TRAV3A0A0B4J244 114 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms