RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 S100A10P60903 97 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RPL31P62899 125 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 UBA52P62987 128 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 NDUFA5Q16718 116 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LTC4SQ16873 150 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 IZUMO4Q1ZYL8 232 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 Q3ZCU0 254 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RPL39P5Q59GN2 51 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 CLLU1Q5K131 121 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PRAMEF5Q5TYX0 476 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 BTNL3Q6UXE8 466 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 HEPN1Q6WQI6 88 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SLC25A48Q6ZT89 311 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 C8orf31Q8N9H6 132 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 INO80EQ8NBZ0 244 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 C8orf46Q8TAG6 207 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RNF141Q8WVD5 230 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 GLMPQ8WWB7 406 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 NEU4Q8WWR8 484 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ST8SIA2Q92186 375 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LEAP2Q969E1 77 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SAT2Q96F10 170 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SPIN2AQ99865 258 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 SPIN2BQ9BPZ2 258 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PIMREGQ9BSJ6 248 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ABHD14AQ9BUJ0 271 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RAB1BQ9H0U4 201 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 ARV1Q9H2C2 271 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PLEKHF2Q9H8W4 249 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PLEKHA2Q9HB19 425 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RAB9BQ9NP90 201 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 COA4Q9NYJ1 87 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 GNG12Q9UBI6 72 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 NSG2Q9Y328 171 aa5.34□□□□□ -1.55
CAPN3-210ENST00000561817 LSM5Q9Y4Y9 91 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 RBM7Q9Y580 266 aaKnown RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 KLF2Q9Y5W3 355 aaPredicted RBP5.34□□□□□ -1.55
CAPN3-210ENST00000561817 PTPN13Q12923 2485 aa5.34□□□□□ -1.56
CAPN3-210ENST00000561817 SAA2-SAA4A0A096LPE2 208 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 PIGBOS1A0A0B4J2F0 54 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 A0A1W2PPE3 182 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 HSBP1L1C9JCN9 74 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 H0Y8G0 127 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 RBFOX2O43251 390 aaKnown RBP eCLIP5.33□□□□□ -1.561e-6■■■■■ 32.4
CAPN3-210ENST00000561817 IFNA7P01567 189 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 IGHV3-7P01780 117 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 RLN2P04090 185 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 LIPFP07098 398 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 NMBP08949 121 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 STAG3L3P0CL85 134 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 PET100P0DJ07 73 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 SAA2P0DJI9 122 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 RPL12P30050 165 aaKnown RBP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 MC5RP33032 325 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 NKX2-1P43699 371 aaPredicted RBP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 GPR12P47775 334 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 P2RY1P47900 373 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 RAB7AP51149 207 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 POLR2GP62487 172 aaKnown RBP eCLIP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 SCGB2A2Q13296 93 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 SMCO1Q147U7 214 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 LRRC10Q5BKY1 277 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 GPR157Q5UAW9 335 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 DGAT2L7PQ6IED9 249 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 SPAG16Q8N0X2 631 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 LINC00311Q8N616 119 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 NHLRC2Q8NBF2 726 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 LY6G5BQ8NDX9 201 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 SCARB1Q8WTV0 552 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 ST6GALNAC6Q969X2 333 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF714Q96N38 554 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 KRTAP4-7Q9BYR0 210 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 WFDC1Q9HC57 220 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 ZFP57Q9NU63 452 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 ZNRD1Q9P1U0 126 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 CACNG5Q9UF02 275 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 UBQLN2Q9UHD9 624 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 STRAPQ9Y3F4 350 aaKnown RBP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 MMP24Q9Y5R2 645 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 U3KQE9 123 aa5.33□□□□□ -1.56
CAPN3-210ENST00000561817 YLPM1P49750 1951 aaKnown RBP5.33□□□□□ -1.56
CAPN3-210ENST00000561817 DOCK11Q5JSL3 2073 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 KANTRA0A1W2PQU2 76 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 IGSF23A1L1A6 192 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 M0R1X1 148 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 RAB29O14966 203 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 GPR137BO60478 399 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 NDUFS7O75251 213 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 GAPDHP04406 335 aaKnown RBP5.32□□□□□ -1.56
CAPN3-210ENST00000561817 IL6RP08887 468 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-210ENST00000561817 CT45A6P0DMU7 189 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 CT45A5P0DMU8 189 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 CT45A7P0DMV0 189 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 DAOP14920 347 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF137PP52743 207 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 TMEM33P57088 247 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 TLE4Q04727 773 aa5.32□□□□□ -1.56
CAPN3-210ENST00000561817 ZNF816Q0VGE8 651 aaPredicted RBP5.32□□□□□ -1.56
CAPN3-210ENST00000561817 CATR1Q13166 79 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms