RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 KRASP01116 189 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 GAPDHP04406 335 aaKnown RBP9.11□□□□□ -0.95
SNX1-212ENST00000560861 ARG1P05089 322 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 NQO2P16083 231 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 EPHA1P21709 976 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 HTR1DP28221 377 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 UBE2E1P51965 193 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 ARHGDIBP52566 201 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 MINOS1Q5TGZ0 78 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 THOC7Q6I9Y2 204 aaKnown RBP9.11□□□□□ -0.95
SNX1-212ENST00000560861 LHFPL4Q7Z7J7 247 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 PDPNQ86YL7 162 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 OSR1Q8TAX0 266 aaPredicted RBP9.11□□□□□ -0.95
SNX1-212ENST00000560861 RRNAD1Q96FB5 475 aaKnown RBP9.11□□□□□ -0.95
SNX1-212ENST00000560861 REG4Q9BYZ8 158 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 WASHC3Q9Y3C0 194 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 MINOS1-NBL1R4GNA1 71 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 CSPG4Q6UVK1 2322 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 ZANQ9Y493 2812 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 ABCA1O95477 2261 aa9.11□□□□□ -0.95
SNX1-212ENST00000560861 FLNAP21333 2647 aaKnown RBP9.1□□□□□ -0.95
SNX1-212ENST00000560861 TRAV20A0A0B4J274 112 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 CENPVL3A0A0U1RRI6 287 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 OOSP1A8MZH6 123 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 FAM90A26D6RGX4 464 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 RNF223E7ERA6 249 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 ARPC5O15511 151 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 ST8SIA3O43173 380 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 IGLV2-23P01705 113 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 APOA2P02652 100 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 OR9G9P0C7N8 305 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 MC5RP33032 325 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 NKX2-1P43699 371 aaPredicted RBP9.1□□□□□ -0.95
SNX1-212ENST00000560861 RELBQ01201 579 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 RTL8BQ17RB0 113 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 FOXRED2Q8IWF2 684 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 PUSL1Q8N0Z8 303 aaKnown RBP9.1□□□□□ -0.95
SNX1-212ENST00000560861 DYNAPQ8N1N2 210 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 THAP6Q8TBB0 222 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 ZDHHC16Q969W1 377 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 RHOVQ96L33 236 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 ZFP57Q9NU63 452 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 TMEM140Q9NV12 185 aa9.1□□□□□ -0.95
SNX1-212ENST00000560861 TBL2Q9Y4P3 447 aaKnown RBP9.1□□□□□ -0.95
SNX1-212ENST00000560861 TRAV3A0A0B4J244 114 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 MSGN1A6NI15 193 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 TMEM50AO95807 157 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 IGHV4-31P0DP07 118 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 RAB13P51153 203 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 PAX9P55771 341 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 S100A10P60903 97 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 POLR2GP62487 172 aaKnown RBP eCLIP9.09□□□□□ -0.95
SNX1-212ENST00000560861 ZNF345Q14585 488 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 MRGPRG-AS1Q2M3A8 158 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 PDLIM3Q53GG5 364 aaPredicted RBP9.09□□□□□ -0.95
SNX1-212ENST00000560861 OR4A47Q6IF82 309 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 H2BFWTQ7Z2G1 175 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 ZNF546Q86UE3 836 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 VKORC1L1Q8N0U8 176 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 OR8H3Q8N146 312 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 KCNRGQ8N5I3 272 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 LINC01356Q8N9X3 169 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 RNASE11Q8TAA1 199 aaKnown RBP9.09□□□□□ -0.95
SNX1-212ENST00000560861 C17orf50Q8WW18 174 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 LHX4Q969G2 390 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 RPEQ96AT9 228 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 RITA1Q96K30 269 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 Q96MF0 132 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 AQP10Q96PS8 301 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 FOXC2Q99958 501 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 BET1LQ9NYM9 111 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 HSPB7Q9UBY9 170 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 LSM5Q9Y4Y9 91 aaKnown RBP9.09□□□□□ -0.95
SNX1-212ENST00000560861 HSPB11Q9Y547 144 aa9.09□□□□□ -0.95
SNX1-212ENST00000560861 A0A1W2PRD5 423 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 A0A1W2PRF3 423 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 A0A1W2PRM7 423 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 E5RGE8 158 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 UPK2O00526 184 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 SNAPC5O75971 98 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 VENTXO95231 258 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 SCGB1D2O95969 90 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 HRASP01112 189 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 CRYGBP07316 175 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 PET100P0DJ07 73 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 HKR1P10072 659 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 GATA3P23771 443 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 CD1BP29016 333 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 CEACAM3P40198 252 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 ERVK-16P61578 105 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 IFITM2Q01629 132 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 TMEM249Q2WGJ8 235 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 ACOT7LQ6ZUV0 252 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 SSX9Q7RTT3 188 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 ZNF429Q86V71 674 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 PDZD9Q8IXQ8 264 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 TMEM167AQ8TBQ9 72 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 FLYWCH2Q96CP2 140 aaKnown RBP9.08□□□□□ -0.96
SNX1-212ENST00000560861 MFFQ9GZY8 342 aa9.08□□□□□ -0.96
SNX1-212ENST00000560861 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms