RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 GTSCR1Q86UQ5 136 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 SLC25A42Q86VD7 318 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 VSTM2AQ8TAG5 236 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 ZNF430Q9H8G1 570 aaPredicted RBP9.38□□□□□ -0.91
SPG11-219ENST00000559822 TXNL4BQ9NX01 149 aaKnown RBP9.38□□□□□ -0.91
SPG11-219ENST00000559822 SSR3Q9UNL2 185 aa9.38□□□□□ -0.91
SPG11-219ENST00000559822 IGKV1D-8A0A087WSZ0 117 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 AIREO43918 545 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 TUSC2O75896 110 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
SPG11-219ENST00000559822 APELAP0DMC3 54 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 RHOGP84095 191 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 ATP5G2Q06055 141 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 MRGPRG-AS1Q2M3A8 158 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 HAPLN4Q86UW8 402 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 NR2C2APQ86WQ0 139 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 Q8N402 240 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 OR2K2Q8NGT1 345 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 OR4S2Q8NH73 311 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 HSD17B10Q99714 261 aaKnown RBP9.37□□□□□ -0.91
SPG11-219ENST00000559822 TM2D3Q9BRN9 247 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 YTHDF1Q9BYJ9 559 aaKnown RBP9.37□□□□□ -0.91
SPG11-219ENST00000559822 PALMDQ9NP74 551 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 DAPK2Q9UIK4 370 aa9.37□□□□□ -0.91
SPG11-219ENST00000559822 RBMX2Q9Y388 322 aaKnown RBP9.37□□□□□ -0.91
SPG11-219ENST00000559822 SMIM30A4D0T7 59 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 TMEM235A6NFC5 223 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 J3QRK9 145 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 NFYAP23511 347 aaPredicted RBP9.36□□□□□ -0.91
SPG11-219ENST00000559822 SCAND1P57086 179 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 EXOSC2Q13868 293 aaKnown RBP9.36□□□□□ -0.91
SPG11-219ENST00000559822 CASC10Q5T4H9 136 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 SFXN4Q6P4A7 337 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 SPARTQ8N0X7 666 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 Q8N1Y9 231 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 NECAP1Q8NC96 275 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 NUDCD2Q8WVJ2 157 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 CITED4Q96RK1 184 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 AKIP1Q9NQ31 210 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 C19orf73Q9NVV2 129 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 ANXA10Q9UJ72 324 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 ELF5Q9UKW6 265 aaPredicted RBP9.36□□□□□ -0.91
SPG11-219ENST00000559822 ZNF257Q9Y2Q1 563 aa9.36□□□□□ -0.91
SPG11-219ENST00000559822 RRP15Q9Y3B9 282 aaKnown RBP9.36□□□□□ -0.91
SPG11-219ENST00000559822 TRBV9A0A0B4J1U6 114 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 DPPA5A6NC42 116 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 CSN3P07498 182 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 LYL1P12980 280 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 MAS1LP35410 378 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 KIR2DS2P43631 304 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 ARPC4P59998 168 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 DEFA5Q01523 94 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 IL34Q6ZMJ4 242 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 ZNF66Q6ZN08 573 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 TTC9CQ8N5M4 171 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 LGALS14Q8TCE9 139 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 TCTEX1D2Q8WW35 142 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 SPATA25Q9BR10 227 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 AIFM2Q9BRQ8 373 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 OR51E2Q9H255 320 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 TUBA4BQ9H853 241 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 RHBDL2Q9NX52 303 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 ETV7Q9Y603 341 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 TNCP24821 2201 aa9.35□□□□□ -0.91
SPG11-219ENST00000559822 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.91
SPG11-219ENST00000559822 A0A0A6YYH2 397 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 A6NJ64 397 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 KBTBD11O94819 623 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 DHFRP00374 187 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 HRASP01112 189 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 TRBV12-3P01733 135 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 RPL30P62888 115 aaKnown RBP9.34□□□□□ -0.91
SPG11-219ENST00000559822 MSMO1Q15800 293 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 OR2B11Q5JQS5 317 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 LAX1Q8IWV1 398 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 ISOC1Q96CN7 298 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 KCTD12Q96CX2 325 aaKnown RBP9.34□□□□□ -0.91
SPG11-219ENST00000559822 OR2A7Q96R45 310 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 SPATA2Q9UM82 520 aa9.34□□□□□ -0.91
SPG11-219ENST00000559822 IGKV1D-13A0A0B4J2D9 117 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 NPIPB5A8MRT5 1133 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 BMPR1BO00238 502 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 TMEM127O75204 238 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 IGLV2-14P01704 120 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 PRH1P02810 166 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 IFNA6P05013 189 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 IGKV1-13P0DP09 117 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 SDC2P34741 201 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 RPL27AP46776 148 aaKnown RBP9.33□□□□□ -0.92
SPG11-219ENST00000559822 ZNF45Q02386 682 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 C15orf32Q32M92 178 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 C10orf55Q5SWW7 151 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 ZBTB34Q8NCN2 500 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 BEST4Q8NFU0 473 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 TMEM167AQ8TBQ9 72 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 DYNLRB2Q8TF09 96 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 TAS2R8Q9NYW2 309 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 ADAM30Q9UKF2 790 aa9.33□□□□□ -0.92
SPG11-219ENST00000559822 SSX5O60225 188 aa9.32□□□□□ -0.92
SPG11-219ENST00000559822 RBMXL2O75526 392 aaKnown RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms