RNA–Protein interactions for RNA: ENST00000557740.5

SHMT2-235, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-235ENST00000557740 FCGR1BQ92637 280 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 SNAPC3Q92966 411 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 SPIN2AQ99865 258 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 SPIN2BQ9BPZ2 258 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 DCSTAMPQ9H295 470 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
SHMT2-235ENST00000557740 DAPK2Q9UIK4 370 aa11.18□□□□□ -0.62
SHMT2-235ENST00000557740 TMEM235A6NFC5 223 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 OR2A4O95047 310 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 NFYAP23511 347 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-235ENST00000557740 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-235ENST00000557740 OR2B11Q5JQS5 317 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 CASC10Q5T4H9 136 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 TPRA1Q86W33 373 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 MMD2Q8IY49 270 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 Q9H521 79 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 ZNF430Q9H8G1 570 aaPredicted RBP11.17□□□□□ -0.62
SHMT2-235ENST00000557740 PALMDQ9NP74 551 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 SSR3Q9UNL2 185 aa11.17□□□□□ -0.62
SHMT2-235ENST00000557740 RBMX2Q9Y388 322 aaKnown RBP11.17□□□□□ -0.62
SHMT2-235ENST00000557740 RRP15Q9Y3B9 282 aaKnown RBP11.17□□□□□ -0.62
SHMT2-235ENST00000557740 A8MZ25 164 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 PRH1P02810 166 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 LYL1P12980 280 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 ATP5G2Q06055 141 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 C10orf55Q5SWW7 151 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 SFXN4Q6P4A7 337 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 CNIH2Q6PI25 160 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 IL34Q6ZMJ4 242 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 SPARTQ8N0X7 666 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 Q8N1Y9 231 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 Q8N402 240 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 OR4S2Q8NH73 311 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 LGALS14Q8TCE9 139 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 TCTEX1D2Q8WW35 142 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 HSD17B10Q99714 261 aaKnown RBP11.16□□□□□ -0.62
SHMT2-235ENST00000557740 TM2D3Q9BRN9 247 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 AKIP1Q9NQ31 210 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 PEMTQ9UBM1 199 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
SHMT2-235ENST00000557740 RYR3Q15413 4870 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 IGKV1D-13A0A0B4J2D9 117 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 RBMXL2O75526 392 aaKnown RBP11.15□□□□□ -0.62
SHMT2-235ENST00000557740 HLA-DQB1P01920 261 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 IGKV1-13P0DP09 117 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 SLC25A42Q86VD7 318 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 CITED4Q96RK1 184 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 C19orf73Q9NVV2 129 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 RHBDL2Q9NX52 303 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 ANXA10Q9UJ72 324 aa11.15□□□□□ -0.62
SHMT2-235ENST00000557740 BMPR1BO00238 502 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 AIREO43918 545 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 CSN3P07498 182 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 ARPC4P59998 168 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 FAM209BQ5JX69 171 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 VKORC1L1Q8N0U8 176 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 TTC9CQ8N5M4 171 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 NECAP1Q8NC96 275 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 OR51E2Q9H255 320 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 TUBA4BQ9H853 241 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 SPATA2Q9UM82 520 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 TNCP24821 2201 aa11.14□□□□□ -0.63
SHMT2-235ENST00000557740 TRBV9A0A0B4J1U6 114 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 DPPA5A6NC42 116 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 SSX5O60225 188 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 KBTBD11O94819 623 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 ATP6V1G2O95670 118 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 RPL30P62888 115 aaKnown RBP11.13□□□□□ -0.63
SHMT2-235ENST00000557740 ZNF45Q02386 682 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 C15orf32Q32M92 178 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 OR2K2Q8NGT1 345 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 OR2A7Q96R45 310 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 SPATA25Q9BR10 227 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 TAS2R8Q9NYW2 309 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 ZNF257Q9Y2Q1 563 aa11.13□□□□□ -0.63
SHMT2-235ENST00000557740 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.12□□□□□ -0.63
SHMT2-235ENST00000557740 HMX3A6NHT5 357 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 OR2J3O76001 311 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 IGLV2-14P01704 120 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 SDC2P34741 201 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 KIR2DS2P43631 304 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 RPL27AP46776 148 aaKnown RBP11.12□□□□□ -0.63
SHMT2-235ENST00000557740 SCAND1P57086 179 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 MXD1Q05195 221 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 ZNF66Q6ZN08 573 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 BEST4Q8NFU0 473 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 FYTTD1Q96QD9 318 aaKnown RBP11.12□□□□□ -0.63
SHMT2-235ENST00000557740 YTHDF1Q9BYJ9 559 aaKnown RBP11.12□□□□□ -0.63
SHMT2-235ENST00000557740 ETV7Q9Y603 341 aa11.12□□□□□ -0.63
SHMT2-235ENST00000557740 TRAV18A0A075B6X5 111 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 LOC100506127A0A0U1RQW1 187 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 IZUMO1RA6ND01 250 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 NPIPB5A8MRT5 1133 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 TEX22C9J3V5 150 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 HRASP01112 189 aa11.11□□□□□ -0.63
SHMT2-235ENST00000557740 MAS1LP35410 378 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms