RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 LIN54Q6MZP7 749 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 MOB3BQ86TA1 216 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 CD300LFQ8TDQ1 290 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 CFHR4Q92496 578 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 RBPMSQ93062 196 aaKnown RBP13.16□□□□□ -0.3
PCNX4-213ENST00000556907 NABP2Q9BQ15 211 aa13.16□□□□□ -0.3
PCNX4-213ENST00000556907 GOSR2O14653 212 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 SERPINE2P07093 398 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 CT45A6P0DMU7 189 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 CT45A5P0DMU8 189 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 CT45A7P0DMV0 189 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 PAX6P26367 422 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 RAB13P51153 203 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 BRWD1-AS2P59051 145 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 EBI3Q14213 229 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 C2orf68Q2NKX9 166 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 ZNF585BQ52M93 769 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 DHRS7BQ6IAN0 325 aaPredicted RBP13.15□□□□□ -0.3
PCNX4-213ENST00000556907 AKAP14Q86UN6 197 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 SPAG16Q8N0X2 631 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 ZNF383Q8NA42 475 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 OR4S2Q8NH73 311 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 COMMD9Q9P000 198 aa13.15□□□□□ -0.3
PCNX4-213ENST00000556907 FAM181BA6NEQ2 426 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 M0QZK8 103 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 IGKV1-39P01597 117 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 APOA2P02652 100 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 IGKV1D-39P04432 117 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 CXCL3P19876 107 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 MC5RP33032 325 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 REG1BP48304 166 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 OR2B11Q5JQS5 317 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 TMEM268Q5VZI3 342 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 ZNF695Q8IW36 515 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 SELENOHQ8IZQ5 122 aaKnown RBP13.14□□□□□ -0.31
PCNX4-213ENST00000556907 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 DRAXINQ8NBI3 349 aaPredicted RBP13.14□□□□□ -0.31
PCNX4-213ENST00000556907 UXS1Q8NBZ7 420 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 OR5AN1Q8NGI8 311 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 OR2T10Q8NGZ9 312 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 ASB13Q8WXK3 278 aa13.14□□□□□ -0.31
PCNX4-213ENST00000556907 RANBP3Q9H6Z4 567 aaPredicted RBP13.14□□□□□ -0.31
PCNX4-213ENST00000556907 A0A1B0GUS0 222 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 H0YJW9 148 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 RAMP3O60896 148 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 OR2F2O95006 317 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 S1PR2O95136 353 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 NDUFA7O95182 113 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 SNRNP70P08621 437 aaKnown RBP13.13□□□□□ -0.31
PCNX4-213ENST00000556907 HKR1P10072 659 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 RRASP10301 218 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 LINC00205P59089 165 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 FOXL1Q12952 345 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 LY6EQ16553 131 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 RTL8BQ17RB0 113 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 KRTAP24-1Q3LI83 254 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 PDPNQ86YL7 162 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 OR8H1Q8NGG4 311 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 RBM14Q96PK6 669 aaKnown RBP13.13□□□□□ -0.31
PCNX4-213ENST00000556907 NEURL2Q9BR09 285 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 NPFFR1Q9GZQ6 430 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 PLEKHA2Q9HB19 425 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 SLC35D1Q9NTN3 355 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 TMED3Q9Y3Q3 217 aa13.13□□□□□ -0.31
PCNX4-213ENST00000556907 TMEM89A2RUT3 159 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 CCSO14618 274 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 FCGR3BO75015 233 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 ADAP1O75689 374 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 HPRT1P00492 218 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 MOSP00540 346 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 GIPP09681 153 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-213ENST00000556907 LPAR6P43657 344 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 SRSF4Q08170 494 aaKnown RBP13.12□□□□□ -0.31
PCNX4-213ENST00000556907 HES1Q14469 280 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 NMSQ5H8A3 153 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 LSM10Q969L4 123 aaKnown RBP13.12□□□□□ -0.31
PCNX4-213ENST00000556907 ST6GAL2Q96JF0 529 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 RNF5Q99942 180 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 ZNF436Q9C0F3 470 aaPredicted RBP13.12□□□□□ -0.31
PCNX4-213ENST00000556907 C1RLQ9NZP8 487 aa13.12□□□□□ -0.31
PCNX4-213ENST00000556907 PFDN1O60925 122 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 CCNKO75909 580 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 TSPAN9O75954 239 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 ATG12O94817 140 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 OR2A4O95047 310 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 IFNA21P01568 189 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 IGKV1D-33P01593 117 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 IGKV1-33P01594 117 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 HOXB5P09067 269 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 TMEM11P17152 192 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 VDAC1P21796 283 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 H2BFSP57053 126 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 SRSF2Q01130 221 aaKnown RBP13.11□□□□□ -0.31
PCNX4-213ENST00000556907 CD83Q01151 205 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 GGNBP1Q5YKI7 109 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 GSG1LQ6UXU4 331 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 LYZL2Q7Z4W2 148 aa13.11□□□□□ -0.31
PCNX4-213ENST00000556907 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms