RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 RBM11P57052 281 aaKnown RBP2.46□□□□□ -2.02
SCFD1-209ENST00000553280 AP3S2P59780 193 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 CCL7P80098 99 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 FABP9Q0Z7S8 132 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 PMAIP1Q13794 54 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.46□□□□□ -2.02
SCFD1-209ENST00000553280 HIST2H3PS2Q5TEC6 136 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 BRD3OSQ6XYD6 125 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 CLDN22Q8N7P3 220 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 OR4C16Q8NGL9 310 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 OR1L8Q8NGR8 309 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 CLDND2Q8NHS1 167 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 SGMS2Q8NHU3 365 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 SFRP2Q96HF1 295 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 NMNAT3Q96T66 252 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 GPR84Q9NQS5 396 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 TXNL4BQ9NX01 149 aaKnown RBP2.46□□□□□ -2.02
SCFD1-209ENST00000553280 AK3Q9UIJ7 227 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 OTOFQ9HC10 1997 aa2.46□□□□□ -2.02
SCFD1-209ENST00000553280 TMEM235A6NFC5 223 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 EEF1E1-BLOC1S5C9J1V9 151 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 INMT-MINDY4F8WBC2 141 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 H3BPC8 53 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 TAS2R30P59541 319 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 SMARCD3Q6STE5 483 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 LRRC25Q8N386 305 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-209ENST00000553280 ANKRD7Q92527 254 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 C20orf166-AS1Q96NR2 134 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 OR52E6Q96RD3 313 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 MIEN1Q9BRT3 115 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 PECRQ9BY49 303 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
SCFD1-209ENST00000553280 ZNF337Q9Y3M9 751 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 ABCC12Q96J65 1359 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 CHD5Q8TDI0 1954 aa2.45□□□□□ -2.02
SCFD1-209ENST00000553280 DICER1Q9UPY3 1922 aaKnown RBP2.44□□□□□ -2.02
SCFD1-209ENST00000553280 NAV1Q8NEY1 1877 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 ZNF73O43830 326 aaPredicted RBP2.44□□□□□ -2.02
SCFD1-209ENST00000553280 CD79AP11912 226 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 XCL1P47992 114 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 ERVS71-1P61550 626 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 GNA12Q03113 381 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 CAV1Q03135 178 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 SRSF6Q13247 344 aaKnown RBP2.44□□□□□ -2.02
SCFD1-209ENST00000553280 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 PRAP1Q96NZ9 151 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 FAM96AQ9H5X1 160 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 TUBA4BQ9H853 241 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 PSORS1C2Q9UIG4 136 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 PRELID1Q9Y255 219 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 ANGPT4Q9Y264 503 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 MINOS1-NBL1R4GNA1 71 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 GRIN2BQ13224 1484 aa2.44□□□□□ -2.02
SCFD1-209ENST00000553280 ZFYVE9O95405 1425 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 A0A0J9YX75 114 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 A8MUN3 132 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 ODF3BA8MYP8 253 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 NPYP01303 97 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 IFNA6P05013 189 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 TAS2R20P59543 309 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 REEP5Q00765 189 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 GLT6D1Q7Z4J2 308 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 PACRGLQ8N7B6 248 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 OR2T4Q8NH00 348 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 SMCR5Q8TEV8 140 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 CNBD2Q96M20 576 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 ZNF471Q9BX82 626 aaPredicted RBP2.43□□□□□ -2.02
SCFD1-209ENST00000553280 MMACHCQ9Y4U1 282 aa2.43□□□□□ -2.02
SCFD1-209ENST00000553280 FLT4P35916 1363 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 SDHAF1A6NFY7 115 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 PSMD12O00232 456 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-209ENST00000553280 PLA2G10O15496 165 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 TRAPPC3O43617 180 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 ATP5HO75947 161 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 CD24P25063 80 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 FUSP35637 526 aaKnown RBP eCLIP2.42□□□□□ -2.02
SCFD1-209ENST00000553280 GABRA4P48169 554 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 GZMMP51124 257 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 ACOT6Q3I5F7 207 aaPredicted RBP2.42□□□□□ -2.02
SCFD1-209ENST00000553280 OR13C8Q8NGS7 320 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 ROPN1LQ96C74 230 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 PSTPIP2Q9H939 334 aa2.42□□□□□ -2.02
SCFD1-209ENST00000553280 LCTP09848 1927 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 MDFIC2A0A1B0GVS7 189 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 PQLC2LA1A4F0 135 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 SMIM9A6NGZ8 99 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 FGF6P10767 208 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 BLVRBP30043 206 aaPredicted RBP2.41□□□□□ -2.02
SCFD1-209ENST00000553280 PSME3P61289 254 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 FOXF1Q12946 379 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 AKIRIN2Q53H80 203 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 TTTY13Q9BZ97 58 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 NUP160Q12769 1436 aa2.41□□□□□ -2.02
SCFD1-209ENST00000553280 CACNA1SQ13698 1873 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 A0A1W2PQD3 144 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 C11orf86A6NJI1 115 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 BHLHE40O14503 412 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 GNRH2O43555 120 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 FADS1O60427 444 aa2.4□□□□□ -2.03
SCFD1-209ENST00000553280 ZNF728P0DKX0 622 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms