RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 AIREO43918 545 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 CREBL2O60519 120 aaPredicted RBP5.79□□□□□ -1.48
NEK3-201ENST00000550331 CSN3P07498 182 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 FCGR3AP08637 254 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 CD3GP09693 182 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 OR9G9P0C7N8 305 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 HSMCR30P0CW71 290 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 CALRP27797 417 aaKnown RBP5.79□□□□□ -1.48
NEK3-201ENST00000550331 CLDN12P56749 244 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 UBE2KP61086 200 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 RPS25P62851 125 aaKnown RBP5.79□□□□□ -1.48
NEK3-201ENST00000550331 PRSS8Q16651 343 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 MRGPRG-AS1Q2M3A8 158 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 C2orf76Q3KRA6 126 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 VMA21Q3ZAQ7 101 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 IGSF11Q5DX21 431 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 FAM223AQ8IWN6 122 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 LAX1Q8IWV1 398 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 ADAD2Q8NCV1 583 aaKnown RBP5.79□□□□□ -1.48
NEK3-201ENST00000550331 BVESQ8NE79 360 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 OR2K2Q8NGT1 345 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 OSR1Q8TAX0 266 aaPredicted RBP5.79□□□□□ -1.48
NEK3-201ENST00000550331 DDB2Q92466 427 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 SNAPC3Q92966 411 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 RAB3CQ96E17 227 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 PHB2Q99623 299 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 DUSP21Q9H596 190 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 TUBA4BQ9H853 241 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 ACOT13Q9NPJ3 140 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 RAB22AQ9UL26 194 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 TPRKBQ9Y3C4 175 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 V9GY05 133 aa5.79□□□□□ -1.48
NEK3-201ENST00000550331 TMEM272A0A1B0GTI8 110 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 SHISA3A0PJX4 238 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 RBMY1BA6NDE4 496 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 RBMY1EA6NEQ0 496 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 MSGN1A6NI15 193 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 SRRM4A7MD48 611 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 MFNGO00587 321 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 RGS10O43665 173 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 TRBV12-3P01733 135 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 RBMY1DP0C7P1 496 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 GSTT2P0CG29 244 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 GSTT2BP0CG30 244 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 HIST1H1DP16402 221 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 GADD45AP24522 165 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 MECP2P51608 486 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 FABP5Q01469 135 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 FAM209BQ5JX69 171 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 Q6ZS49 121 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 OR10R2Q8NGX6 335 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 SRSF12Q8WXF0 261 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 C5orf30Q96GV9 206 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 ZNF230Q9UIE0 474 aaPredicted RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 RBM7Q9Y580 266 aaKnown RBP5.78□□□□□ -1.48
NEK3-201ENST00000550331 HECTD4Q9Y4D8 3996 aa5.78□□□□□ -1.48
NEK3-201ENST00000550331 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 TRBV9A0A0B4J1U6 114 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 RAB27BO00194 218 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 PDCD5O14737 125 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 MPPED1O15442 326 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 EIF4EBP3O60516 100 aaPredicted RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 RBMXL2O75526 392 aaKnown RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 TPPPO94811 219 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 CRYZL1O95825 349 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 GNB3P16520 340 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 DUTP33316 252 aaKnown RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 RHOGP84095 191 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 DEFA5Q01523 94 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 PLA2G7Q13093 441 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 EXOSC2Q13868 293 aaKnown RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 ARL6IP1Q15041 203 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 CDK10Q15131 360 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 TNXAQ16473 311 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 HES5Q5TA89 166 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 LINC00322Q6ZN03 302 aaPredicted RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 IDO2Q6ZQW0 420 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 PRSS48Q7RTY5 328 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 H1FOOQ8IZA3 346 aaPredicted RBP5.77□□□□□ -1.49
NEK3-201ENST00000550331 NECAP1Q8NC96 275 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 IL17DQ8TAD2 202 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 ACOT12Q8WYK0 555 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 MGLLQ99685 303 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 SPIN2AQ99865 258 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 SPIN2BQ9BPZ2 258 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 GINS4Q9BRT9 223 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 AKIP1Q9NQ31 210 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 SLC2A8Q9NY64 477 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 ADAM30Q9UKF2 790 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 DNAH10Q8IVF4 4471 aa5.77□□□□□ -1.49
NEK3-201ENST00000550331 TRAV1-2A0A0B4J238 106 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 IZUMO1RA6ND01 250 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 METTL21EPA6NDL7 271 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 IFITM5A6NNB3 132 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 LINC00473A8K010 186 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 BMPR1BO00238 502 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 TUSC2O75896 110 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 ACTL6BO94805 426 aa5.76□□□□□ -1.49
NEK3-201ENST00000550331 SAA1P0DJI8 122 aaPredicted RBP5.76□□□□□ -1.49
NEK3-201ENST00000550331 APELAP0DMC3 54 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms