RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 LINC00473A8K010 186 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 A8MZ25 164 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 FCGR3BO75015 233 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 TUSC2O75896 110 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 OR2A4O95047 310 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 MAS1LP35410 378 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 KIR2DS2P43631 304 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 ATP5G2Q06055 141 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 RPEL1Q2QD12 228 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 ZNF773Q6PK81 442 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 KCTD9Q7L273 389 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 CROCCP3Q8IVE0 287 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 SGPP2Q8IWX5 399 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 TTC9CQ8N5M4 171 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 ZBTB34Q8NCN2 500 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 OR4S2Q8NH73 311 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 ACOT12Q8WYK0 555 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 C5orf30Q96GV9 206 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 OR51E2Q9H255 320 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 DIABLOQ9NR28 239 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 RHBDL2Q9NX52 303 aa8.34□□□□□ -1.07
VTI1BP3-201ENST00000550220 ANKRD34BA5PLL1 514 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 TMEM235A6NFC5 223 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 DHFRP00374 187 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 HRASP01112 189 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 FRMD6-AS1P0C7T7 363 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 NFYAP23511 347 aaPredicted RBP8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 SDC2P34741 201 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 ARPC4P59998 168 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 DYRK1AQ13627 763 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 TIMM50Q3ZCQ8 353 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 LCN12Q6JVE5 192 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 NECAP1Q8NC96 275 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR2K2Q8NGT1 345 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 NUDCD2Q8WVJ2 157 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 BORCS5Q969J3 196 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR2A7Q96R45 310 aa8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 ZNF430Q9H8G1 570 aaPredicted RBP8.33□□□□□ -1.08
VTI1BP3-201ENST00000550220 TRBV9A0A0B4J1U6 114 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 SMIM30A4D0T7 59 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 DPPA5A6NC42 116 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 J3QRK9 145 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 SNRPBP14678 240 aaKnown RBP8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 CBX5P45973 191 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 SYNJ2BPP57105 145 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 RHOGP84095 191 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 MRGPRG-AS1Q2M3A8 158 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 IDO2Q6ZQW0 420 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 GTSCR1Q86UQ5 136 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 Q8N402 240 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 MFSD4AQ8N468 514 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 BEST4Q8NFU0 473 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 OR4A5Q8NH83 315 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 LGALS14Q8TCE9 139 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 TCTEX1D2Q8WW35 142 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 KCTD12Q96CX2 325 aaKnown RBP8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 RCHY1Q96PM5 261 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 ELF5Q9UKW6 265 aaPredicted RBP8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 ZNF257Q9Y2Q1 563 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 COL7A1Q02388 2944 aa8.32□□□□□ -1.08
VTI1BP3-201ENST00000550220 TRAV18A0A075B6X5 111 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 LOC100506127A0A0U1RQW1 187 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 TRIM64CA6NLI5 447 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 SSX5O60225 188 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 KBTBD11O94819 623 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 IGLV2-14P01704 120 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 MXD1Q05195 221 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 IDNKQ5T6J7 187 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 IL34Q6ZMJ4 242 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 HOGA1Q86XE5 327 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 Q8N1Y9 231 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 TMEM167AQ8TBQ9 72 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 CD300LFQ8TDQ1 290 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 S100A16Q96FQ6 103 aaKnown RBP8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 AKIP1Q9NQ31 210 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 SLC2A9Q9NRM0 540 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 SPATA2Q9UM82 520 aa8.31□□□□□ -1.08
VTI1BP3-201ENST00000550220 IGKV1D-13A0A0B4J2D9 117 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 NPIPB5A8MRT5 1133 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 CSN3P07498 182 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 APELAP0DMC3 54 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 IGHV4-30-4P0DP06 118 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 IGKV1-13P0DP09 117 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 HIST1H1BP16401 226 aaKnown RBP8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 FCGR2CP31995 323 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 RPL30P62888 115 aaKnown RBP8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 CATR1Q13166 79 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 EXOSC2Q13868 293 aaKnown RBP8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 KCTD21Q4G0X4 260 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 LAX1Q8IWV1 398 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 PUSL1Q8N0Z8 303 aaKnown RBP8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 MUC7Q8TAX7 377 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 VCX3AQ9NNX9 186 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
VTI1BP3-201ENST00000550220 BET1LQ9NYM9 111 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms