RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 COMMD3Q9UBI1 195 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 FBXO7Q9Y3I1 522 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 DNAH17Q9UFH2 4485 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 SRRM4A7MD48 611 aaKnown RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 G3V318 75 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 RPLP1P05386 114 aaKnown RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 IGHV4-30-4P0DP06 118 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 SPNP16150 400 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 MSMO1Q15800 293 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 MRGPRG-AS1Q2M3A8 158 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 TMEM69Q5SWH9 247 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 GPR141Q7Z602 305 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 BVESQ8NE79 360 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 OR5AP2Q8NGF4 316 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 METTL1Q9UBP6 276 aaKnown RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 RBMX2Q9Y388 322 aaKnown RBP10.75□□□□□ -0.69
PTCH1-217ENST00000548420 WSB1Q9Y6I7 421 aa10.75□□□□□ -0.69
PTCH1-217ENST00000548420 DNAH6Q9C0G6 4158 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 TRAV41A0A0B4J266 112 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-217ENST00000548420 ELK1P19419 428 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 FCGR2CP31995 323 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 PRSS3P35030 304 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 BRWD1-AS2P59051 145 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 ARPC4P59998 168 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 RPL30P62888 115 aaKnown RBP10.74□□□□□ -0.69
PTCH1-217ENST00000548420 RTL8BQ17RB0 113 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 DHRS11Q6UWP2 260 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 LCNL1Q6ZST4 164 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 GPX8Q8TED1 209 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 RETNQ9HD89 108 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 PARP11Q9NR21 331 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 TPSG1Q9NRR2 321 aa10.74□□□□□ -0.69
PTCH1-217ENST00000548420 J3QRK9 145 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 HPGDSO60760 199 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 GP9P14770 177 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 AADACP22760 399 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 CDK10Q15131 360 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 PLGLAQ15195 96 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 HAGHQ16775 308 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 PPP1R27Q86WC6 154 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 LYSMD2Q8IV50 215 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 Q8N1Y9 231 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 TCTEX1D1Q8N7M0 179 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 OSR1Q8TAX0 266 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-217ENST00000548420 BCL7BQ9BQE9 202 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 KLK15Q9H2R5 256 aa10.73□□□□□ -0.69
PTCH1-217ENST00000548420 SMIM31A0A1B0GVY4 71 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 MEIS3P1A6NDR6 274 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 ARPC1BO15143 372 aaKnown RBP10.72□□□□□ -0.69
PTCH1-217ENST00000548420 SHOXO15266 292 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 SOX15O60248 233 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 TPPPO94811 219 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 CA2P00918 260 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 PPYP01298 95 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 RPL5P46777 297 aaKnown RBP10.72□□□□□ -0.69
PTCH1-217ENST00000548420 RAB9AP51151 201 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 TMBIM6P55061 237 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 UBE2KP61086 200 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 TMEM267Q0VDI3 215 aaPredicted RBP10.72□□□□□ -0.69
PTCH1-217ENST00000548420 PJVKQ0ZLH3 352 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 DYRK1AQ13627 763 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 MZT2AQ6P582 158 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF66Q6ZN08 573 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF491Q8N8L2 437 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 ZBTB34Q8NCN2 500 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 AP3S1Q92572 193 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 UBE2E2Q96LR5 201 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 HARBI1Q96MB7 349 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 CLCC1Q96S66 551 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 HSD17B10Q99714 261 aaKnown RBP10.72□□□□□ -0.69
PTCH1-217ENST00000548420 SCPEP1Q9HB40 452 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 ADAM30Q9UKF2 790 aa10.72□□□□□ -0.69
PTCH1-217ENST00000548420 SULT1C2O00338 296 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 CRYZL1O95825 349 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 FCER2P06734 321 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 RUNX1Q01196 453 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 CBX3Q13185 183 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 FXYD3Q14802 87 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 SPCS2Q15005 226 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 MFSD4AQ8N468 514 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 RAB2BQ8WUD1 216 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 C4orf3Q8WVX3 66 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 FAM110AQ9BQ89 295 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 IFT46Q9NQC8 304 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 CCL28Q9NRJ3 127 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 FOXA2Q9Y261 457 aaPredicted RBP10.71□□□□□ -0.69
PTCH1-217ENST00000548420 PRELID3BQ9Y3B1 194 aa10.71□□□□□ -0.69
PTCH1-217ENST00000548420 PKD1P98161 4303 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 A8MZ25 164 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 I3L521 148 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 IFNA6P05013 189 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 RFX2P48378 723 aa10.7□□□□□ -0.7
PTCH1-217ENST00000548420 KCTD9Q7L273 389 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms